Masuda S, Yoshida M, Nagashima K V, Shimada K, Matsuura K
Department of Biology, Tokyo Metropolitan University, Minamiohsawa, Hachioji, Tokyo 192-0397, Japan.
J Biol Chem. 1999 Apr 16;274(16):10795-801. doi: 10.1074/jbc.274.16.10795.
The nucleotide sequence of the puf operon, which contains the genes encoding the B870 light-harvesting protein and the reaction center complex of the purple photosynthetic bacterium, Rhodovulum sulfidophilum, was determined. The operon, which consisted of six genes, pufQ, pufB, pufA, pufL, pufM, and pufC, is a new variety in photosynthetic bacteria in the sense that pufQ and pufC coexist. The amino acid sequence of the cytochrome subunit of the reaction center deduced from the pufC sequence revealed that this cytochrome contains only three possible heme-binding motifs; the heme-1-binding motif of the corresponding tetraheme cytochrome subunits was not present. This is the first exception of the "tetraheme" cytochrome family in purple bacteria and green filamentous bacteria. The pufC sequence also revealed that the sixth axial ligands to heme-1 and heme-2 irons were not present in the cytochrome either. This cytochrome was actually detected in membrane preparation as a 43-kDa protein and shown to associate functionally with the photosynthetic reaction center as the immediate electron donor to the photo-oxidized special pair of bacteriochlorophyll. This new cytochrome should be useful for studies on the role of each heme in the cytochrome subunit of the bacterial reaction center and the evolution of proteins in photosynthetic electron transfer systems.
测定了嗜硫小红卵菌(Rhodovulum sulfidophilum)的puf操纵子的核苷酸序列,该操纵子包含编码B870光捕获蛋白和紫色光合细菌反应中心复合物的基因。该操纵子由六个基因pufQ、pufB、pufA、pufL、pufM和pufC组成,就pufQ和pufC共存这一点而言,它是光合细菌中的一个新变种。从pufC序列推导的反应中心细胞色素亚基的氨基酸序列显示,该细胞色素仅包含三个可能的血红素结合基序;相应的四血红素细胞色素亚基的血红素-1结合基序不存在。这是紫色细菌和绿色丝状细菌中“四血红素”细胞色素家族的首个例外。pufC序列还显示,该细胞色素中也不存在血红素-1和血红素-2铁的第六个轴向配体。这种细胞色素实际上在膜制备物中被检测为一种43 kDa的蛋白质,并显示出作为光氧化特殊对细菌叶绿素的直接电子供体在功能上与光合反应中心相关联。这种新的细胞色素对于研究每个血红素在细菌反应中心细胞色素亚基中的作用以及光合电子传递系统中蛋白质的进化应该是有用的。