红环菌属菌株BSW8的基因组序列草图及简要历史
Draft Genome Sequence and Brief History of Rhodovulum sp. Strain BSW8.
作者信息
Rayyan Amiera A, Meyer Terry E, Kyndt John A
机构信息
College of Science and Technology, Bellevue University, Bellevue, Nebraska, USA.
Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona, USA.
出版信息
Microbiol Resour Announc. 2018 Aug 23;7(7). doi: 10.1128/MRA.00983-18. eCollection 2018 Aug.
Abstract
Rhodovulum is a marine Gram-negative purple photosynthetic bacterial genus that is a member of the . Strain BSW8 is a variant that does not appear to make a polysaccharide slime capsule, and its genome sequence further contributes to the diversity of sequenced genomes belonging to this genus.
摘要
红育菌属是一种海洋革兰氏阴性紫色光合细菌属，是……的成员。菌株BSW8是一种似乎不产生多糖黏液荚膜的变体，其基因组序列进一步丰富了该属已测序基因组的多样性。
相似文献
1
Draft Genome Sequence and Brief History of Rhodovulum sp. Strain BSW8.红环菌属菌株BSW8的基因组序列草图及简要历史
Microbiol Resour Announc. 2018 Aug 23;7(7). doi: 10.1128/MRA.00983-18. eCollection 2018 Aug.
2
Draft genome sequence of Rhodovulum sp. strain PH10, a phototrophic alphaproteobacterium isolated from a soil sample of mangrove of Namkhana, India.Rhodovulum sp. 菌株 PH10 的基因组草案序列，该菌株是从印度纳姆卡纳红树林的土壤样本中分离出来的一种光养α变形菌。
J Bacteriol. 2012 Nov;194(22):6363. doi: 10.1128/JB.01695-12.
3
Draft Genome Sequence of Rhodovulum sp. Strain NI22, a Naphthalene-Degrading Marine Bacterium.萘降解海洋细菌红环菌属菌株NI22的基因组序列草图
Genome Announc. 2015 Jan 22;3(1):e01475-14. doi: 10.1128/genomeA.01475-14.
4
Rhodovulum mangrovi sp. nov., a phototrophic alphaproteobacterium isolated from a mangrove forest sediment sample.红游动菌属红树林新种，一种从红树林森林沉积物样本中分离得到的光养α变形菌。
Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3168-3173. doi: 10.1099/ijs.0.059857-0. Epub 2014 Jun 27.
5
Rhodovulum bhavnagarense sp. nov., a phototrophic alphaproteobacterium isolated from a pink pond.红游动菌属 bhavnagarense 新种，一种从粉红色池塘中分离得到的好氧 α-变形菌。
Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2528-2532. doi: 10.1099/ijs.0.036152-0. Epub 2011 Dec 16.
6
Rhodovulum marinum sp. nov., a novel phototrophic purple non-sulfur alphaproteobacterium from marine tides of Visakhapatnam, India.海生红游动菌新种，一种来自印度维沙卡帕特南海潮的新型光合紫色非硫α-变形菌。
Int J Syst Evol Microbiol. 2006 Jul;56(Pt 7):1651-1656. doi: 10.1099/ijs.0.64005-0.
7
Rhodovulum salis sp. nov. and Rhodovulum viride sp. nov., phototrophic Alphaproteobacteria isolated from marine habitats.红杆菌属盐新种和绿红杆菌新种，分别来自海洋生境的光养 α-变形菌。
Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):957-962. doi: 10.1099/ijs.0.058974-0. Epub 2013 Dec 18.
8
Rhodovulum phaeolacus sp. nov. a phototrophic alphaproteobacterium isolated from a brown pond.新种菲氏红环菌，一种从褐色池塘中分离出的光合α-变形菌。
J Gen Appl Microbiol. 2011;57(3):145-51. doi: 10.2323/jgam.57.145.
9
Rhodovulum aestuarii sp. nov., isolated from a brackish water body.河口红环菌新种，从微咸水体中分离得到。
Int J Syst Evol Microbiol. 2016 Jan;66(1):165-171. doi: 10.1099/ijsem.0.000691. Epub 2015 Oct 15.
10
Rhodovulum lacipunicei sp. nov., an obligate sulfide-demanding phototrophic alphaproteobacterium isolated from a purple pond in India.湖生红育菌新种，一种从印度一个紫色池塘中分离出的专性需硫化物光养型α-变形菌。
Int J Syst Evol Microbiol. 2009 Jul;59(Pt 7):1615-9. doi: 10.1099/ijs.0.007617-0. Epub 2009 Jun 19.
本文引用的文献
1
Draft Genome Sequences of Three Closely Related Isolates of the Purple Nonsulfur Bacterium .紫色非硫细菌三种密切相关分离株的基因组序列草图
Genome Announc. 2017 Mar 16;5(11):e00029-17. doi: 10.1128/genomeA.00029-17.
2
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS：一个基于成对基因组比较进行原核生物物种界定的网络服务器。
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
3
Complete Genome Sequence of Rhodovulum sulfidophilum DSM 2351, an Extracellular Nucleic Acid-Producing Bacterium.嗜硫红假单胞菌DSM 2351的全基因组序列，一种产生细胞外核酸的细菌。
Genome Announc. 2015 Apr 30;3(2):e00388-15. doi: 10.1128/genomeA.00388-15.
4
Whole-Genome Sequence of the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Strain W4.嗜硫小红卵菌菌株W4的全基因组序列
Genome Announc. 2013 Aug 8;1(4):e00577-13. doi: 10.1128/genomeA.00577-13.
5
Albirhodobacter marinus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from sea shore water of Visakhapatnam, India.海洋盐单胞菌属，新属，红杆菌科的一个新种，从印度维萨卡帕特南的海滨水域中分离得到。
Antonie Van Leeuwenhoek. 2013 Feb;103(2):347-55. doi: 10.1007/s10482-012-9814-z. Epub 2012 Sep 22.
6
Evidence from the structure and function of cytochromes c(2) that nonsulfur purple bacterial photosynthesis followed the evolution of oxygen respiration.从细胞色素 c(2)的结构和功能得到的证据表明，非硫紫色细菌光合作用是在氧呼吸进化之后出现的。
Arch Microbiol. 2010 Oct;192(10):855-65. doi: 10.1007/s00203-010-0608-2. Epub 2010 Aug 10.
7
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒：使用德布鲁因图进行从头短读长拼接的算法》
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
8
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
9
Rhodobacter vinaykumarii sp. nov., a marine phototrophic alphaproteobacterium from tidal waters, and emended description of the genus Rhodobacter.潮汐水域的海洋光合α-变形菌新种维奈库马尔红杆菌及红杆菌属的修订描述
Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):1984-1987. doi: 10.1099/ijs.0.65077-0.
10
Phylogenetic distribution of unusual triheme to tetraheme cytochrome subunit in the reaction center complex of purple photosynthetic bacteria.紫色光合细菌反应中心复合物中异常三血红素至四血红素细胞色素亚基的系统发育分布。
Photosynth Res. 2004;79(1):83-91. doi: 10.1023/B:PRES.0000011922.56394.92.
Zotero 插件