Uriarte M, Marina A, Ramón-Maiques S, Fita I, Rubio V
Instituto de Biomedicina de Valencia (Consejo Superior de Investigaciones Científicas), C/Jaime Roig 11, 46010 Valencia, Spain.
J Biol Chem. 1999 Jun 4;274(23):16295-303. doi: 10.1074/jbc.274.23.16295.
The hyperthermophiles Pyrococcus furiosus and Pyrococcus abyssi make pyrimidines and arginine from carbamoyl phosphate (CP) synthesized by an enzyme that differs from other carbamoyl-phosphate synthetases and that resembles carbamate kinase (CK) in polypeptide mass, amino acid sequence, and oligomeric organization. This enzyme was reported to use ammonia, bicarbonate, and two ATP molecules as carbamoyl-phosphate synthetases to make CP and to exhibit bicarbonatedependent ATPase activity. We have reexamined these findings using the enzyme of P. furiosus expressed in Escherichia coli from the corresponding gene cloned in a plasmid. We show that the enzyme uses chemically made carbamate rather than ammonia and bicarbonate and catalyzes a reaction with the stoichiometry and equilibrium that are typical for CK. Furthermore, the enzyme catalyzes actively full reversion of the CK reaction and exhibits little bicarbonate-dependent ATPase. In addition, it cross-reacts with antibodies raised against CK from Enterococcus faecium, and its three-dimensional structure, judged by x-ray crystallography of enzyme crystals, is very similar to that of CK. Thus, the enzyme is, in all respects other than its function in vivo, a CK. Because in other organisms the function of CK is to make ATP from ADP and CP derived from arginine catabolism, this is the first example of using CK for making rather than using CP. The reasons for this use and the adaptation of the enzyme to this new function are discussed.
嗜热栖热菌和深渊嗜热栖热菌利用一种酶合成的氨甲酰磷酸(CP)来合成嘧啶和精氨酸,这种酶不同于其他氨甲酰磷酸合成酶,在多肽质量、氨基酸序列和寡聚体结构上类似于氨基甲酸激酶(CK)。据报道,这种酶像氨甲酰磷酸合成酶一样,利用氨、碳酸氢盐和两个ATP分子来合成CP,并表现出依赖碳酸氢盐的ATP酶活性。我们利用在大肠杆菌中表达的来自克隆于质粒的相应基因的嗜热栖热菌的酶,重新审视了这些发现。我们发现该酶使用化学合成的氨基甲酸酯而非氨和碳酸氢盐,并催化一个具有CK典型化学计量和平衡的反应。此外,该酶能积极催化CK反应的完全逆转,且几乎没有依赖碳酸氢盐的ATP酶活性。另外,它能与针对粪肠球菌CK产生的抗体发生交叉反应,通过酶晶体的X射线晶体学判断,其三维结构与CK非常相似。因此,除了其在体内的功能外,该酶在各方面都是一种CK。因为在其他生物体中,CK的功能是由精氨酸分解代谢产生的ADP和CP生成ATP,所以这是首次将CK用于合成而非利用CP的例子。本文讨论了这种用途的原因以及该酶对这一新功能的适应性。