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肌毒素II的晶体结构,一种从哥德曼氏矛头蝮(学名:Cerrophidion (Bothrops) godmani)毒液中分离出的单体Lys49-磷脂酶A2同系物。

Crystal structure of myotoxin II, a monomeric Lys49-phospholipase A2 homologue isolated from the venom of Cerrophidion (Bothrops) godmani.

作者信息

Arni R K, Fontes M R, Barberato C, Gutiérrez J M, Díaz C, Ward R J

机构信息

Department of Physics, IBILCE/UNESP, São José do Rio Preto-SP, Brazil.

出版信息

Arch Biochem Biophys. 1999 Jun 15;366(2):177-82. doi: 10.1006/abbi.1999.1210.

Abstract

Lys49-Phospholipase A2 (Lys49-PLA2) homologues damage membranes by a Ca2+-independent mechanism which does not involve catalytic activity. With the aim of determining the structural basis for this novel activity, we have solved the crystal structure of myotoxin-II, a Lys49-PLA2 isolated from the venom of Cerrophidion (Bothrops) godmani (godMT-II) at 2.8 A resolution by molecular replacement. The final model has been refined to a final crystallografic residual (Rfactor) of 18.8% (Rfree = 28.2%), with excellent stereochemistry. godMT-II is also monomeric in the crystalline state, and small-angle X-ray scattering results demonstrate that the protein is monomeric in solution under fisicochemical conditions similar to those used in the crystallographic studies.

摘要

49位赖氨酸磷脂酶A2(Lys49-PLA2)同源物通过不依赖钙离子的机制破坏细胞膜,该机制不涉及催化活性。为了确定这种新活性的结构基础,我们通过分子置换法以2.8埃的分辨率解析了肌毒素-II的晶体结构,肌毒素-II是一种从哥德曼氏锯鳞蝰(Cerrophidion (Bothrops) godmani)毒液中分离出的Lys49-PLA2(神肌毒素-II,godMT-II)。最终模型已精修至最终晶体学残余因子(R因子)为18.8%(R自由值 = 28.2%),具有优异的立体化学性质。godMT-II在晶体状态下也是单体,小角X射线散射结果表明,在与晶体学研究中使用的类似物理化学条件下,该蛋白在溶液中也是单体。

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