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终止后核糖体与5'非翻译区的相互作用调节酵母mRNA的稳定性。

Post-termination ribosome interactions with the 5'UTR modulate yeast mRNA stability.

作者信息

Vilela C, Ramirez C V, Linz B, Rodrigues-Pousada C, McCarthy J E

机构信息

Post-transcriptional Control Group, Department of Biomolecular Sciences, University of Manchester Institute of Science and Technology (UMIST), PO Box 88, Manchester M60 1QD, UK.

出版信息

EMBO J. 1999 Jun 1;18(11):3139-52. doi: 10.1093/emboj/18.11.3139.

Abstract

A novel form of post-transcriptional control is described. The 5' untranslated region (5'UTR) of the Saccharomyces cerevisiae gene encoding the AP1-like transcription factor Yap2 contains two upstream open reading frames (uORF1 and uORF2). The YAP2-type of uORF functions as a cis-acting element that attenuates gene expression at the level of mRNA turnover via termination-dependent decay. Release of post-termination ribosomes from the YAP2 5'UTR causes accelerated decay which is largely independent of the termination modulator gene UPF1. Both of the YAP2 uORFs contribute to the destabilization effect. A G/C-rich stop codon context, which seems to promote ribosome release, allows an uORF to act as a transferable 5'UTR-destabilizing element. Moreover, termination-dependent destabilization is potentiated by stable secondary structure 3' of the uORF stop codon. The potentiation of uORF-mediated destabilization is eliminated if the secondary structure is located further downstream of the uORF, and is also influenced by a modulatory mechanism involving eIF2. Destabilization is therefore linked to the kinetics of acquisition of reinitiation-competence by post-termination ribosomes in the 5'UTR. Our data explain the destabilizing properties of YAP2-type uORFs and also support a more general model for the mode of action of other known uORFs, such as those in the GCN4 mRNA.

摘要

本文描述了一种新型的转录后调控形式。酿酒酵母中编码AP1样转录因子Yap2的基因的5'非翻译区(5'UTR)包含两个上游开放阅读框(uORF1和uORF2)。YAP2型uORF作为一种顺式作用元件,通过依赖终止的衰变在mRNA周转水平上减弱基因表达。从YAP2 5'UTR释放的终止后核糖体导致加速衰变,这在很大程度上独立于终止调节基因UPF1。YAP2的两个uORF都对去稳定化作用有贡献。富含G/C的终止密码子上下文似乎促进核糖体释放,使uORF能够作为可转移的5'UTR去稳定化元件发挥作用。此外,uORF终止密码子3'端的稳定二级结构增强了依赖终止的去稳定化作用。如果二级结构位于uORF下游更远的位置,uORF介导的去稳定化增强作用就会消除,并且它还受到涉及eIF2的调节机制的影响。因此,去稳定化与5'UTR中终止后核糖体获得重新起始能力的动力学相关。我们的数据解释了YAP2型uORF的去稳定化特性,也支持了其他已知uORF作用模式的更通用模型,例如GCN4 mRNA中的uORF。

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