Chapman K, Mustafa Z, Irven C, Carr A J, Clipsham K, Smith A, Chitnavis J, Sinsheimer J S, Bloomfield V A, McCartney M, Cox O, Cardon L R, Sykes B, Loughlin J
Wellcome Trust Centre for Human Genetics, Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Am J Hum Genet. 1999 Jul;65(1):167-74. doi: 10.1086/302465.
We present a two-stage genomewide scan for osteoarthritis-susceptibility loci, using 481 families that each contain at least one affected sibling pair. The first stage, with 272 microsatellite markers and 297 families, involved a sparse map covering 23 chromosomes at intervals of approximately 15 cM. Sixteen markers that showed evidence of linkage at nominal P</=.05 were then taken through to the second stage, with an additional 184 families. This second stage confirmed evidence of linkage for markers on chromosome 11q. Additional markers from this region were then typed to create a denser map. We obtained a maximum single-point LOD score, at D11S901, of 2.40 (P=.0004) and a maximum multipoint-LOD score of 3.15, between markers D11S1358 and D11S35. A subset of 196 of the 481 families, comprising affected female sibling pairs, generated a corrected LOD score of 2.54 (P=.0003) for marker D11S901, with evidence for linkage extending 12 cM proximal to this marker. When we stratified for affected male sibling pairs there was no evidence of linkage to chromosome 11. Our data suggest that a female-specific susceptibility gene for idiopathic osteoarthritis is located on chromosome 11q.
我们使用481个每个都包含至少一对患病同胞对的家系,进行了一项针对骨关节炎易感基因座的两阶段全基因组扫描。第一阶段,使用272个微卫星标记和297个家系,涉及一个稀疏图谱,以约15厘摩的间距覆盖23条染色体。然后,将16个在名义P值≤0.05时显示连锁证据的标记推进到第二阶段,该阶段又增加了184个家系。第二阶段证实了11号染色体上标记的连锁证据。接着对该区域的其他标记进行分型以创建更密集的图谱。我们在D11S901处获得的最大单点对数优势分数为2.40(P = 0.0004),在标记D11S1358和D11S35之间的最大多点对数优势分数为3.15。481个家系中的196个家系子集,包括患病女性同胞对,对标记D11S901产生了校正后的对数优势分数2.54(P = 0.0003),连锁证据延伸至该标记近端12厘摩处。当我们对患病男性同胞对进行分层时,没有发现与11号染色体连锁的证据。我们的数据表明,特发性骨关节炎的女性特异性易感基因位于11号染色体q臂上。