• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过添加新亚基和保守元件重排实现的捕光蛋白的进化:隐藻藻红蛋白1.63埃分辨率的晶体结构

Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: crystal structure of a cryptophyte phycoerythrin at 1.63-A resolution.

作者信息

Wilk K E, Harrop S J, Jankova L, Edler D, Keenan G, Sharples F, Hiller R G, Curmi P M

机构信息

Initiative in Biomolecular Structure, School of Physics, University of New South Wales, Sydney, NSW 2052, Australia.

出版信息

Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):8901-6. doi: 10.1073/pnas.96.16.8901.

DOI:10.1073/pnas.96.16.8901
PMID:10430868
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC17705/
Abstract

Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels. The crystal structure of the heterodimeric alpha(1)alpha(2)betabeta PE 545 from the marine cryptophyte Rhodomonas CS24 has been determined at 1.63-A resolution. Although the beta-chain structure is similar to the alpha and beta chains of other known phycobiliproteins, the overall structure of PE 545 is novel with the alpha chains forming a simple extended fold with an antiparallel beta-ribbon followed by an alpha-helix. The two doubly linked beta50/beta61 chromophores (one on each beta subunit) are in van der Waals contact, suggesting that exciton-coupling mechanisms may alter their spectral properties. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that is likely to be the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction center.

摘要

隐藻是单细胞光合藻类,其使用位于腔内的光捕获系统,该系统不同于蓝细菌和红藻中发现的藻胆体结构。该系统的关键组成部分之一是水溶性藻红蛋白(PE)545,其表达在低光照水平下会增强。已确定来自海洋隐藻红胞藻CS24的异源二聚体α(1)α(2)ββ PE 545的晶体结构,分辨率为1.63埃。虽然β链结构与其他已知藻胆蛋白的α链和β链相似,但PE 545的整体结构是新颖的,α链形成一个简单的延伸折叠结构,后面跟着一个反平行β带和一个α螺旋。两个双连接的β50/β61发色团(每个β亚基上一个)处于范德华接触,这表明激子耦合机制可能会改变它们的光谱特性。每个α亚基携带一个共价连接的15,16-二氢胆绿素发色团,它可能是最终的能量受体。异源二聚体的结构表明,PE 545可能通过一个深裂缝与受体蛋白对接,并且能量可能通过这个中间蛋白转移到反应中心。

相似文献

1
Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: crystal structure of a cryptophyte phycoerythrin at 1.63-A resolution.通过添加新亚基和保守元件重排实现的捕光蛋白的进化:隐藻藻红蛋白1.63埃分辨率的晶体结构
Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):8901-6. doi: 10.1073/pnas.96.16.8901.
2
Developing a structure-function model for the cryptophyte phycoerythrin 545 using ultrahigh resolution crystallography and ultrafast laser spectroscopy.利用超高分辨率晶体学和超快激光光谱技术建立隐藻藻红蛋白545的结构-功能模型。
J Mol Biol. 2004 Nov 12;344(1):135-53. doi: 10.1016/j.jmb.2004.09.044.
3
Mediation of ultrafast light-harvesting by a central dimer in phycoerythrin 545 studied by transient absorption and global analysis.通过瞬态吸收和全局分析研究藻红蛋白545中中心二聚体对超快光捕获的介导作用。
J Phys Chem B. 2005 Jul 28;109(29):14219-26. doi: 10.1021/jp051173j.
4
An improved crystal structure of C-phycoerythrin from the marine cyanobacterium Phormidium sp. A09DM.海洋蓝藻 Phormidium sp. A09DM 中 C-藻红蛋白的改进晶体结构。
Photosynth Res. 2018 Mar;135(1-3):65-78. doi: 10.1007/s11120-017-0443-2. Epub 2017 Sep 16.
5
Crystal structure analysis of phycoerythrin from marine cyanobacterium .海洋蓝藻藻红蛋白的晶体结构分析
J Biomol Struct Dyn. 2023 Jun;41(9):3752-3761. doi: 10.1080/07391102.2022.2055647. Epub 2022 Mar 31.
6
Crystal structure of a phycourobilin-containing phycoerythrin at 1.90-A resolution.含藻红胆素的藻红蛋白在1.90埃分辨率下的晶体结构。
J Struct Biol. 1999 Jun 15;126(2):86-97. doi: 10.1006/jsbi.1999.4106.
7
Insights into the biosynthesis and assembly of cryptophycean phycobiliproteins.隐藻藻胆蛋白生物合成与组装的见解。
J Biol Chem. 2014 Sep 26;289(39):26691-26707. doi: 10.1074/jbc.M114.591131. Epub 2014 Aug 5.
8
Isolation, crystallization, crystal structure analysis and refinement of B-phycoerythrin from the red alga Porphyridium sordidum at 2.2 A resolution.从紫球藻中分离、结晶、进行2.2埃分辨率的B-藻红蛋白晶体结构分析与精修。
J Mol Biol. 1992 Dec 5;228(3):935-50. doi: 10.1016/0022-2836(92)90876-l.
9
Crystal structure analysis of C-phycoerythrin from marine cyanobacterium Phormidium sp. A09DM.来自海洋蓝藻席藻属A09DM的C-藻红蛋白的晶体结构分析。
Photosynth Res. 2016 Jul;129(1):17-28. doi: 10.1007/s11120-016-0259-5. Epub 2016 Apr 11.
10
Phycobiliprotein diffusion in chloroplasts of cryptophyte Rhodomonas CS24.藻胆蛋白在隐藻红胞藻CS24叶绿体中的扩散
Photosynth Res. 2009 Apr;100(1):7-17. doi: 10.1007/s11120-009-9412-8. Epub 2009 Feb 18.

引用本文的文献

1
Growth phase-dependent reorganization of cryptophyte photosystem I antennae.藻胆体光合系统 I 天线在生长阶段的依赖重组。
Commun Biol. 2024 May 11;7(1):560. doi: 10.1038/s42003-024-06268-5.
2
The structural basis for light harvesting in organisms producing phycobiliproteins.产藻胆蛋白生物体中光捕获的结构基础。
Plant Cell. 2024 Oct 3;36(10):4036-4064. doi: 10.1093/plcell/koae126.
3
Molecular dissection of the soluble photosynthetic antenna from the cryptophyte alga Hemiselmis andersenii.从隐藻 Hemiselmis andersenii 中分离可溶性光合天线的分子剖析。
Commun Biol. 2023 Nov 13;6(1):1158. doi: 10.1038/s42003-023-05508-4.
4
Infrared Signatures of Phycobilins within the Phycocyanin 645 Complex.藻蓝蛋白 645 复合物中藻胆蛋白的红外特征。
J Phys Chem B. 2023 May 25;127(20):4460-4469. doi: 10.1021/acs.jpcb.3c01352. Epub 2023 May 16.
5
Molecular structures reveal the origin of spectral variation in cryptophyte light harvesting antenna proteins.分子结构揭示了隐藻光捕获天线蛋白光谱变化的起源。
Protein Sci. 2023 Mar;32(3):e4586. doi: 10.1002/pro.4586.
6
Improvement of Biomass and Phycoerythrin Production by a Strain of sp. Isolated from the Tunisian Coast of Sidi Mansour.从突尼斯锡迪·曼苏尔海岸分离得到的 sp. 菌株提高生物质和藻红蛋白产量的研究
Biomolecules. 2022 Jun 24;12(7):885. doi: 10.3390/biom12070885.
7
Observation of conformational dynamics in single light-harvesting proteins from cryptophyte algae.隐藻光捕获蛋白构象动力学的观察。
J Chem Phys. 2022 Jul 21;157(3):035102. doi: 10.1063/5.0095763.
8
Controllable Phycobilin Modification: An Alternative Photoacclimation Response in Cryptophyte Algae.可控藻胆蛋白修饰:隐藻的一种替代性光适应反应
ACS Cent Sci. 2022 Mar 23;8(3):340-350. doi: 10.1021/acscentsci.1c01209. Epub 2022 Feb 9.
9
Scaffolding proteins guide the evolution of algal light harvesting antennas.支架蛋白指导藻类光捕获天线的进化。
Nat Commun. 2021 Mar 25;12(1):1890. doi: 10.1038/s41467-021-22128-w.
10
The Potential of Cryptophyte Algae in Biomedical and Pharmaceutical Applications.隐藻在生物医学和制药应用中的潜力。
Front Pharmacol. 2021 Feb 2;11:618836. doi: 10.3389/fphar.2020.618836. eCollection 2020.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Refinement of macromolecular structures by the maximum-likelihood method.用最大似然法优化大分子结构。
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55. doi: 10.1107/S0907444996012255.
3
Automated refinement of protein models.蛋白质模型的自动优化
Acta Crystallogr D Biol Crystallogr. 1993 Jan 1;49(Pt 1):129-47. doi: 10.1107/S0907444992008886.
4
Structural analysis at 2.2 A of orthorhombic crystals presents the asymmetry of the allophycocyanin-linker complex, AP.LC7.8, from phycobilisomes of Mastigocladus laminosus.对来自层理鞭枝藻藻胆体的正交晶体在2.2埃分辨率下进行的结构分析显示了别藻蓝蛋白-连接体复合物AP.LC7.8的不对称性。
Proc Natl Acad Sci U S A. 1999 Feb 16;96(4):1363-8. doi: 10.1073/pnas.96.4.1363.
5
The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae.隐藻纲藻类 Guillardia theta 的质体基因组:完整序列和保守的同线群证实了它与红藻的共同祖先关系。
J Mol Evol. 1999 Feb;48(2):236-44. doi: 10.1007/pl00006462.
6
Crystallization of phycoerythrin 545 of Rhodomonas lens using detergents and unusual additives.利用去污剂和特殊添加剂对莱茵衣藻藻红蛋白545进行结晶。
Protein Sci. 1998 Mar;7(3):580-6. doi: 10.1002/pro.5560070306.
7
Phycoerythrin 545: monomers, energy migration, bilin topography, and monomer/dimer equilibrium.藻红蛋白545:单体、能量迁移、藻胆素拓扑结构及单体/二聚体平衡
Biochemistry. 1998 Jan 6;37(1):417-23. doi: 10.1021/bi971453s.
8
Crystal structure of R-phycoerythrin from Polysiphonia urceolata at 2.8 A resolution.来自多管藻的R-藻红蛋白在2.8埃分辨率下的晶体结构。
J Mol Biol. 1996 Oct 11;262(5):721-31. doi: 10.1006/jmbi.1996.0547.
9
Phycobilins of cryptophycean algae. Novel linkage of dihydrobiliverdin in a phycoerythrin 555 and a phycocyanin 645.隐藻藻胆蛋白。二氢胆绿素在藻红蛋白555和藻蓝蛋白645中的新连接方式。
J Biol Chem. 1993 Jan 25;268(3):1658-69.
10
SETOR: hardware-lighted three-dimensional solid model representations of macromolecules.SETOR:大分子的硬件照明三维实体模型表示
J Mol Graph. 1993 Jun;11(2):134-8, 127-8. doi: 10.1016/0263-7855(93)87009-t.