Lin C H, Chan F C, Hwang J K, Lyu P C
Department of Life Sciences, National Tsing-Hua University,Hsin-Chu 30043, Taiwan.
Protein Eng. 1999 Jul;12(7):589-95. doi: 10.1093/protein/12.7.589.
Conantokin-T (con-T) and conantokin-G (con-G) are two highly homologous peptide toxins found in Conus venom. The former is a 21-residue peptide with four gamma-carboxyglutamic acid (Gla) residues (at positions 3, 4, 10 and 14), while the latter is a 17-residue peptide with five gamma-carboxyglutamic acid residues (at positions 3, 4, 7, 10 and 14). Despite the apparent similarity in number and relative positions of the gamma-carboxyglutamic acid residues, (113)Cd-NMR studies indicated a distinct metal binding behavior for con-G and con-T. There appears to be four binding sites in con-G in contrast to one metal binding site in con-T. To elucidate the mode of calcium binding by the gamma-carboxyglutamic acid residues in these conantokins, we designed various analogous peptides with their gamma-carboxyglutamic acid replaced by other amino acid residues. (113)Cd-NMR experiments on conantokin analogues reveal that the major difference in the number of metal binding sites between con-G and con-T is due to the residue at position 7. We also performed molecular simulations to calculate the relative binding free energies of several potential binding sites. Based on our theoretical and experimental results, we propose a 'four-site' binding model for conantokin-G and a 'single-site' binding model for conantokin-T.
芋螺毒素 -T(Con-T)和芋螺毒素 -G(Con-G)是在芋螺毒液中发现的两种高度同源的肽毒素。前者是一种含有四个γ-羧基谷氨酸(Gla)残基(位于第3、4、10和14位)的21个氨基酸残基的肽,而后者是一种含有五个γ-羧基谷氨酸残基(位于第3、4、7、10和14位)的17个氨基酸残基的肽。尽管γ-羧基谷氨酸残基的数量和相对位置明显相似,但113Cd-NMR研究表明Con-G和Con-T具有不同的金属结合行为。Con-G似乎有四个结合位点,而Con-T只有一个金属结合位点。为了阐明这些芋螺毒素中γ-羧基谷氨酸残基的钙结合模式,我们设计了各种类似肽,将其γ-羧基谷氨酸替换为其他氨基酸残基。对芋螺毒素类似物的113Cd-NMR实验表明,Con-G和Con-T之间金属结合位点数量的主要差异是由于第7位的残基。我们还进行了分子模拟,以计算几个潜在结合位点的相对结合自由能。基于我们的理论和实验结果,我们提出了芋螺毒素 -G的“四位点”结合模型和芋螺毒素 -T的“单位点”结合模型。