van Nimwegen E, Crutchfield J P, Huynen M
Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA.
Proc Natl Acad Sci U S A. 1999 Aug 17;96(17):9716-20. doi: 10.1073/pnas.96.17.9716.
We introduce and analyze a general model of a population evolving over a network of selectively neutral genotypes. We show that the population's limit distribution on the neutral network is solely determined by the network topology and given by the principal eigenvector of the network's adjacency matrix. Moreover, the average number of neutral mutant neighbors per individual is given by the matrix spectral radius. These results quantify the extent to which populations evolve mutational robustness-the insensitivity of the phenotype to mutations-and thus reduce genetic load. Because the average neutrality is independent of evolutionary parameters-such as mutation rate, population size, and selective advantage-one can infer global statistics of neutral network topology by using simple population data available from in vitro or in vivo evolution. Populations evolving on neutral networks of RNA secondary structures show excellent agreement with our theoretical predictions.
我们引入并分析了一个在选择性中性基因型网络上进化的种群通用模型。我们表明,种群在中性网络上的极限分布仅由网络拓扑结构决定,并由网络邻接矩阵的主特征向量给出。此外,每个个体的中性突变邻居的平均数量由矩阵谱半径给出。这些结果量化了种群进化出突变鲁棒性(即表型对突变的不敏感性)从而降低遗传负荷的程度。由于平均中性与进化参数(如突变率、种群大小和选择优势)无关,人们可以通过使用来自体外或体内进化的简单种群数据来推断中性网络拓扑结构的全局统计信息。在RNA二级结构的中性网络上进化的种群与我们的理论预测表现出极好的一致性。