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蛋白质折叠中的快速事件:超快pH跃变诱导的脱辅基肌红蛋白从N态到I态转变早期事件伴随的结构体积变化

Fast events in protein folding: structural volume changes accompanying the early events in the N-->I transition of apomyoglobin induced by ultrafast pH jump.

作者信息

Abbruzzetti S, Crema E, Masino L, Vecli A, Viappiani C, Small J R, Libertini L J, Small E W

机构信息

Dipartimento di Fisica, Università di Parma, 43100 Parma, Italia.

出版信息

Biophys J. 2000 Jan;78(1):405-15. doi: 10.1016/S0006-3495(00)76603-3.

Abstract

Ultrafast, laser-induced pH jump with time-resolved photoacoustic detection has been used to investigate the early protonation steps leading to the formation of the compact acid intermediate (I) of apomyoglobin (ApoMb). When ApoMb is in its native state (N) at pH 7.0, rapid acidification induced by a laser pulse leads to two parallel protonation processes. One reaction can be attributed to the binding of protons to the imidazole rings of His24 and His119. Reaction with imidazole leads to an unusually large contraction of -82 +/- 3 ml/mol, an enthalpy change of 8 +/- 1 kcal/mol, and an apparent bimolecular rate constant of (0.77 +/- 0.03) x 10(10) M(-1) s(-1). Our experiments evidence a rate-limiting step for this process at high ApoMb concentrations, characterized by a value of (0. 60 +/- 0.07) x 10(6) s(-1). The second protonation reaction at pH 7. 0 can be attributed to neutralization of carboxylate groups and is accompanied by an apparent expansion of 3.4 +/- 0.2 ml/mol, occurring with an apparent bimolecular rate constant of (1.25 +/- 0.02) x 10(11) M(-1) s(-1), and a reaction enthalpy of about 2 kcal/mol. The activation energy for the processes associated with the protonation of His24 and His119 is 16.2 +/- 0.9 kcal/mol, whereas that for the neutralization of carboxylates is 9.2 +/- 0.9 kcal/mol. At pH 4.5 ApoMb is in a partially unfolded state (I) and rapid acidification experiments evidence only the process assigned to carboxylate protonation. The unusually large contraction and the high energetic barrier observed at pH 7.0 for the protonation of the His residues suggests that the formation of the compact acid intermediate involves a rate-limiting step after protonation.

摘要

利用超快激光诱导的pH跃变结合时间分辨光声检测技术,研究了导致脱辅基肌红蛋白(ApoMb)紧密酸中间体(I)形成的早期质子化步骤。当ApoMb在pH 7.0处于天然状态(N)时,激光脉冲诱导的快速酸化导致两个平行的质子化过程。一个反应可归因于质子与His24和His119的咪唑环结合。与咪唑的反应导致异常大的收缩,为-82±3 ml/mol,焓变为8±1 kcal/mol,表观双分子速率常数为(0.77±0.03)×10¹⁰ M⁻¹ s⁻¹。我们的实验证明,在高ApoMb浓度下,该过程存在限速步骤,其值为(0.60±0.07)×10⁶ s⁻¹。在pH 7.0时的第二个质子化反应可归因于羧基的中和,伴随着表观膨胀3.4±0.2 ml/mol,表观双分子速率常数为(1.25±0.02)×10¹¹ M⁻¹ s⁻¹,反应焓约为2 kcal/mol。与His24和His119质子化相关过程的活化能为16.2±0.9 kcal/mol,而羧基中和的活化能为9.2±0.9 kcal/mol。在pH 4.5时,ApoMb处于部分展开状态(I),快速酸化实验仅证明了归因于羧基质子化的过程。在pH 7.0时,His残基质子化观察到的异常大收缩和高能垒表明,紧密酸中间体的形成涉及质子化后的限速步骤。

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