Richard S B, Madern D, Garcin E, Zaccai G
Institut de Biologie Structurale, CEA-CNRS, 41 Avenue des Martyrs, F-38027 Grenoble Cedex 1, France.
Biochemistry. 2000 Feb 8;39(5):992-1000. doi: 10.1021/bi991001a.
Previous biophysical studies of tetrameric malate dehydrogenase from the halophilic archaeon Haloarcula marismortui (Hm MalDH) have revealed the importance of protein-solvent interactions for its adaptation to molar salt conditions that strongly affect protein solubility, stability, and activity, in general. The structures of the E267R stability mutant of apo (-NADH) Hm MalDH determined to 2.6 A resolution and of apo (-NADH) wild type Hm MalDH determined to 2.9 A resolution, presented here, highlight a variety of novel protein-solvent features involved in halophilic adaptation. The tetramer appears to be stabilized by ordered water molecule networks and intersubunit complex salt bridges "locked" in by bound solvent chloride and sodium ions. The E267R mutation points into a central ordered water cavity, disrupting protein-solvent interactions. The analysis of the crystal structures showed that halophilic adaptation is not aimed uniquely at "protecting" the enzyme from the extreme salt conditions, as may have been expected, but, on the contrary, consists of mechanisms that harness the high ionic concentration in the environment.
先前对嗜盐古菌盐沼盐杆菌(Haloarcula marismortui,简称Hm MalDH)的四聚体苹果酸脱氢酶进行的生物物理研究表明,蛋白质与溶剂的相互作用对于其适应摩尔盐条件至关重要,一般来说,这种条件会强烈影响蛋白质的溶解度、稳定性和活性。本文展示的脱辅基(-NADH)Hm MalDH的E267R稳定性突变体结构(分辨率为2.6 Å)和脱辅基(-NADH)野生型Hm MalDH结构(分辨率为2.9 Å)突出了嗜盐适应过程中涉及的多种新型蛋白质-溶剂特征。四聚体似乎通过有序水分子网络和亚基间复合盐桥得以稳定,这些盐桥被结合的溶剂氯离子和钠离子“锁定”。E267R突变指向一个中央有序水腔,破坏了蛋白质与溶剂的相互作用。晶体结构分析表明,嗜盐适应并非如预期的那样仅仅旨在“保护”酶免受极端盐条件的影响,相反,它包括利用环境中高离子浓度的机制。