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通过带选择性绝热去耦法对溶解在稀液晶相中的蛋白质光谱进行谱线变窄:应用于1HN-15N剩余偶极耦合测量

Line narrowing in spectra of proteins dissolved in a dilute liquid crystalline phase by band-selective adiabatic decoupling: application to 1HN-15N residual dipolar coupling measurements.

作者信息

Vander Kooi C W, Kupce E, Zuiderweg E R, Pellecchia M

机构信息

Department of Chemistry, University of Michigan, Ann Arbor 48109, USA.

出版信息

J Biomol NMR. 1999 Dec;15(4):335-8. doi: 10.1023/a:1008387305293.

DOI:10.1023/a:1008387305293
PMID:10685341
Abstract

Residual heteronuclear dipolar couplings obtained from partially oriented protein samples can provide unique NMR constraints for protein structure determination. However, partial orientation of protein samples also causes severe 1H line broadening resulting from residual 1H-1H dipolar couplings. In this communication we show that band-selective 1H homonuclear decoupling during data acquisition is an efficient way to suppress residual 1H-1H dipolar couplings, resulting in spectra that are still amenable to solution NMR analysis, even with high degrees of alignment. As an example, we present a novel experiment with improved sensitivity for the measurement of one-bond 1HN-15N residual dipolar couplings in a protein sample dissolved in magnetically aligned liquid crystalline bicelles.

摘要

从部分取向的蛋白质样品中获得的残留异核偶极耦合可为蛋白质结构测定提供独特的核磁共振(NMR)约束条件。然而,蛋白质样品的部分取向也会因残留的1H-1H偶极耦合导致严重的1H谱线展宽。在本通讯中,我们表明在数据采集过程中进行带选择性1H同核去耦是抑制残留1H-1H偶极耦合的有效方法,即使在高度取向的情况下,所得光谱仍适用于溶液NMR分析。例如,我们展示了一个新颖的实验,该实验提高了在溶解于磁取向液晶双分子层中的蛋白质样品中测量一键1HN-15N残留偶极耦合的灵敏度。

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本文引用的文献

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Pulse sequences for measurement of one-bond (15)N-(1)H coupling constants in the protein backbone.用于测量蛋白质主链中一键(15)N-(1)H耦合常数的脉冲序列。
J Magn Reson. 1999 Sep;140(1):259-63. doi: 10.1006/jmre.1999.1820.
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The use of dipolar couplings for determining the solution structure of rat apo-S100B(betabeta).利用偶极耦合来确定大鼠载脂蛋白S100B(ββ)的溶液结构。
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A doublet-separated sensitivity-enhanced HSQC for the determination of scalar and dipolar one-bond J-couplings.
用于提高肽和蛋白质的NOE和RDC测量分辨率及灵敏度的同核去耦。
J Magn Reson. 2014 Apr;241:97-102. doi: 10.1016/j.jmr.2013.11.006. Epub 2013 Nov 22.
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Very large residual dipolar couplings from deuterated ubiquitin.来自氘代泛素的非常大的残余偶极耦合。
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J Biomol NMR. 2004 Jul;29(3):259-69. doi: 10.1023/B:JNMR.0000032548.60663.1f.
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Measurement of small scalar and dipolar couplings in purine and pyrimidine bases.嘌呤和嘧啶碱基中小标量和偶极耦合的测量。
J Biomol NMR. 2001 Oct;21(2):153-60. doi: 10.1023/a:1012435106858.
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TROSY NMR with partially deuterated proteins.使用部分氘代蛋白质的横向弛豫优化光谱核磁共振技术
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J Biomol NMR. 1999 Feb;13(2):175-80. doi: 10.1023/a:1008301415843.
4
Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions.丝状噬菌体对大分子的可调谐排列产生偶极耦合相互作用。
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