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基因pvaB编码假单胞菌属VM15C菌株的氧化聚乙烯醇水解酶,并与聚乙烯醇脱氢酶基因pvaA形成一个操纵子。

The gene pvaB encodes oxidized polyvinyl alcohol hydrolase of Pseudomonas sp. strain VM15C and forms an operon with the polyvinyl alcohol dehydrogenase gene pvaA.

作者信息

Shimao Masayuki, Tamogami Tsuyoshi, Kishida Shinsuke, Harayama Shigeaki

机构信息

Department of Biotechnology, Tottori University, Tottori, Tottori 680-8552, Japan1.

Marine Biotechnology Institute, Kamaishi Laboratory, Kamaishi, Iwate 026-0001, Japan2.

出版信息

Microbiology (Reading). 2000 Mar;146 ( Pt 3):649-657. doi: 10.1099/00221287-146-3-649.

Abstract

A 5.7 kbp SphI fragment containing the polyvinyl alcohol (PVA) dehydrogenase gene pvaA and its 1.9 kbp 5'-flanking region was cloned from the PVA-degrading bacterium Pseudomonas sp. VM15C. The pvaB gene, encoding oxidized PVA hydrolase, was found in the region upstream of pvaA. Sequence data and expression studies indicated that pvaA and B constitute an operon in the order pvaBA. The pvaB gene encoded a protein of 379 amino acid residues (40610 Da), and a lipoprotein signal sequence and the lipase consensus sequence, Gly-X-Ser-X-Gly, characteristic of the active-site serine region in serine hydrolases, were detected in the deduced amino acid sequence. The pvaB product with the pvaA product constituted an enzyme system for the cleavage of PVA molecules. The pvaA product introduced beta-diketone groups into the PVA molecule, and the pvaB product hydrolysed these beta-diketone groups in oxidized PVA. The pvaB product also hydrolysed 4,6-nonanedione at a low rate, but not acetylacetone or 5-nonanone. It was completely inhibited by PMSF and was concluded to be a serine hydrolase. There were no proteins showing high similarity to the pvaB product in the databases, but minor similarity to a number of serine hydrolases including polyhydroxyalkanoate depolymerases was apparent.

摘要

从聚乙烯醇(PVA)降解菌假单胞菌属VM15C中克隆到一个5.7kbp的SphI片段,该片段包含PVA脱氢酶基因pvaA及其1.9kbp的5'侧翼区。编码氧化型PVA水解酶的pvaB基因位于pvaA上游区域。序列数据和表达研究表明,pvaA和B按pvaBA顺序构成一个操纵子。pvaB基因编码一个由379个氨基酸残基组成的蛋白质(40610Da),在推导的氨基酸序列中检测到一个脂蛋白信号序列和脂肪酶共有序列Gly-X-Ser-X-Gly,这是丝氨酸水解酶活性位点丝氨酸区域的特征。pvaB产物与pvaA产物构成了一个切割PVA分子的酶系统。pvaA产物将β-二酮基团引入PVA分子,pvaB产物水解氧化型PVA中的这些β-二酮基团。pvaB产物也能以低速率水解4,6-壬二酮,但不能水解乙酰丙酮或5-壬酮。它被苯甲基磺酰氟完全抑制,因此被确定为一种丝氨酸水解酶。数据库中没有与pvaB产物高度相似的蛋白质,但与包括聚羟基脂肪酸酯解聚酶在内的一些丝氨酸水解酶有轻微相似性。

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