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氧化聚乙烯醇酶促降解的结构见解

Structural insights into enzymatic degradation of oxidized polyvinyl alcohol.

作者信息

Yang Yu, Ko Tzu-Ping, Liu Long, Li Jianghua, Huang Chun-Hsiang, Chan Hsiu-Chien, Ren Feifei, Jia Dongxu, Wang Andrew H-J, Guo Rey-Ting, Chen Jian, Du Guocheng

机构信息

Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Lihu Ave. 1800, Wuxi 214122 (China).

出版信息

Chembiochem. 2014 Sep 5;15(13):1882-6. doi: 10.1002/cbic.201402166. Epub 2014 Jul 8.

Abstract

The ever-increasing production and use of polyvinyl alcohol (PVA) threaten our environment. Yet PVA can be assimilated by microbes in two steps: oxidation and cleavage. Here we report novel α/β-hydrolase structures of oxidized PVA hydrolase (OPH) from two known PVA-degrading organisms, Sphingopyxis sp. 113P3 and Pseudomonas sp. VM15C, including complexes with substrate analogues, acetylacetone and caprylate. The active site is covered by a lid-like β-ribbon. Unlike other esterase and amidase, OPH is unique in cleaving the CC bond of β-diketone, although it has a catalytic triad similar to that of most α/β-hydrolases. Analysis of the crystal structures suggests a double-oxyanion-hole mechanism, previously only found in thiolase cleaving β-ketoacyl-CoA. Three mutations in the lid region showed enhanced activity, with potential in industrial applications.

摘要

聚乙烯醇(PVA)产量和使用量的不断增加对我们的环境构成了威胁。然而,PVA可被微生物分两步同化:氧化和裂解。在此,我们报道了来自两种已知PVA降解生物——鞘氨醇单胞菌属(Sphingopyxis sp.)113P3和假单胞菌属(Pseudomonas sp.)VM15C的氧化型PVA水解酶(OPH)的新型α/β-水解酶结构,包括与底物类似物、乙酰丙酮和辛酸形成的复合物。活性位点被一个类似盖子的β-丝带覆盖。与其他酯酶和酰胺酶不同,OPH在裂解β-二酮的CC键方面独具特色,尽管它具有与大多数α/β-水解酶相似的催化三联体。晶体结构分析表明存在一种双氧阴离子孔机制,该机制此前仅在裂解β-酮脂酰辅酶A的硫解酶中发现。盖子区域的三个突变显示出活性增强,在工业应用中具有潜力。

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