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抗生物素蛋白的X射线三维结构。

The X-ray three-dimensional structure of avidin.

作者信息

Rosano C, Arosio P, Bolognesi M

机构信息

Centro Biotecnologie Avanzate-IST and Dipartimento di Fisica-INFM, University of Genova, Italy.

出版信息

Biomol Eng. 1999 Dec 31;16(1-4):5-12. doi: 10.1016/s1050-3862(99)00047-9.

DOI:10.1016/s1050-3862(99)00047-9
PMID:10796979
Abstract

Avidin is a basic, highly stable, homotetrameric protein, isolated from bird egg-white, binding up to four molecules of D-biotin with extremely high affinity (Kd approximately 10(-15) M). The protein has been the object of different crystallographic investigations. In all the crystal structures, the four avidin subunits display almost exact 222 symmetry. Each avidin chain (128 amino acids) is arranged in a eight-stranded antiparallel beta-barrel, whose inner region defines the D-biotin binding site. The molecular bases of D-biotin affinity can be recognised in a fairly rigid binding site, which is sterically complementary to the shape and polarity of the incoming vitamin, and is readily accessible in the apoprotein structure. Avidin displays remarkable structural and functional relationships to the acidic protein sretpavidin, isolated from Streptomyces avidinii.

摘要

抗生物素蛋白是一种碱性、高度稳定的同四聚体蛋白,从鸡蛋清中分离得到,能以极高的亲和力(解离常数Kd约为10^(-15) M)结合多达四个D-生物素分子。该蛋白一直是不同晶体学研究的对象。在所有晶体结构中,四个抗生物素蛋白亚基几乎呈现出精确的222对称性。每个抗生物素蛋白链(128个氨基酸)排列成一个八链反平行β桶状结构,其内部区域定义了D-生物素结合位点。D-生物素亲和力的分子基础可在一个相当刚性的结合位点中识别,该位点在空间上与进入的维生素的形状和极性互补,并且在脱辅基蛋白结构中易于接近。抗生物素蛋白与从嗜热栖热放线菌中分离得到的酸性蛋白链霉抗生物素蛋白显示出显著的结构和功能关系。

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The X-ray three-dimensional structure of avidin.抗生物素蛋白的X射线三维结构。
Biomol Eng. 1999 Dec 31;16(1-4):5-12. doi: 10.1016/s1050-3862(99)00047-9.
2
Three-dimensional structure of the tetragonal crystal form of egg-white avidin in its functional complex with biotin at 2.7 A resolution.蛋清抗生物素蛋白与生物素功能复合物的四方晶体形式在2.7埃分辨率下的三维结构。
J Mol Biol. 1993 Jun 5;231(3):698-710. doi: 10.1006/jmbi.1993.1321.
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Dimer-tetramer transition between solution and crystalline states of streptavidin and avidin mutants.链霉亲和素及抗生物素蛋白突变体在溶液态与晶态之间的二聚体 - 四聚体转变
J Bacteriol. 2003 Jul;185(14):4050-6. doi: 10.1128/JB.185.14.4050-4056.2003.
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Three-dimensional structures of avidin and the avidin-biotin complex.抗生物素蛋白及抗生物素蛋白-生物素复合物的三维结构。
Proc Natl Acad Sci U S A. 1993 Jun 1;90(11):5076-80. doi: 10.1073/pnas.90.11.5076.
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(Strept)avidin as a template for ligands other than biotin: An overview.链霉亲和素作为除生物素以外的配体的模板:概述。
Methods Enzymol. 2020;633:21-28. doi: 10.1016/bs.mie.2019.10.029. Epub 2019 Nov 20.
6
Crystal structure of apo-avidin from hen egg-white.来自鸡蛋白的脱辅基抗生物素蛋白的晶体结构。
J Mol Biol. 1994 Jan 7;235(1):42-6. doi: 10.1016/s0022-2836(05)80010-5.
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Genetically engineered avidins and streptavidins.基因工程抗生物素蛋白和链霉抗生物素蛋白。
Cell Mol Life Sci. 2006 Dec;63(24):2992-3017. doi: 10.1007/s00018-006-6288-z.
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Recognition of oxidatively modified bases within the biotin-binding site of avidin.抗生物素蛋白生物素结合位点内氧化修饰碱基的识别。
J Mol Biol. 2006 Mar 17;357(1):263-74. doi: 10.1016/j.jmb.2005.12.054. Epub 2006 Jan 6.
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An avidin-like domain that does not bind biotin is adopted for oligomerization by the extracellular mosaic protein fibropellin.一种不结合生物素的抗生物素蛋白样结构域被细胞外镶嵌蛋白纤维pellin用于寡聚化。
Protein Sci. 2005 Feb;14(2):417-23. doi: 10.1110/ps.04898705.
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Structural and functional characteristics of xenavidin, the first frog avidin from Xenopus tropicalis.热带爪蟾中首个蛙抗生物素蛋白——爪蟾抗生物素蛋白的结构与功能特性
BMC Struct Biol. 2009 Sep 29;9:63. doi: 10.1186/1472-6807-9-63.

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