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细胞色素c氧化酶中氘同位素效应的起始。

The onset of the deuterium isotope effect in cytochrome c oxidase.

作者信息

Karpefors M, Adelroth P, Brzezinski P

机构信息

Department of Biochemistry, The Arrhenius Laboratories for Natural Sciences, Stockholm University, SE-106 91 Stockholm, Sweden.

出版信息

Biochemistry. 2000 May 2;39(17):5045-50. doi: 10.1021/bi9925221.

Abstract

We have investigated the dynamics of proton equilibration within the proton-transfer pathway of cytochrome c oxidase from bovine heart that is used for the transfer of both substrate and pumped protons during reaction of the reduced enzyme with oxygen (D-pathway). The kinetics of the slowest phase in the oxidation of the enzyme (the oxo-ferryl --> oxidized transition, F --> O), which is associated with proton uptake, were studied by monitoring absorbance changes at 445 nm. The rate constant of this transition, which is 800 s(-)(1) in H(2)O (at pH approximately 7.5), displayed a kinetic deuterium isotope effect of approximately 4 (i.e., the rate was approximately 200 s(-)(1) in 100% D(2)O). To investigate the kinetics of the onset of the deuterium isotope effect, fully reduced, solubilized CO-bound cytochrome c oxidase in H(2)O was mixed rapidly at a ratio of 1:5 with a D(2)O buffer saturated with oxygen. After a well-defined time period, CO was flashed off using a short laser flash. The time between mixing and flashing off CO was varied within the range 0. 04-10 s. The results show that for the bovine enzyme, the onset of the deuterium isotope effect takes place within two time windows of </=100 ms and approximately 1 s, respectively. The slow onset of the deuterium isotope effect indicates that the rate-limiting step during the F --> O transition is internal proton transfer from a site, proposed to be Glu (I-286) (R. sphaeroides amino acid residue numbering), to the binuclear center. The spontaneous equilibration of protons/deuterons with this site in the interior of the protein is slow (approximately 1 s).

摘要

我们研究了牛心细胞色素c氧化酶质子转移途径中质子平衡的动力学,该途径在还原酶与氧气反应(D途径)过程中用于底物和泵送质子的转移。通过监测445 nm处的吸光度变化,研究了与质子摄取相关的酶氧化最慢阶段(氧合铁卟啉→氧化转变,F→O)的动力学。该转变的速率常数在H₂O中(pH约为7.5时)为800 s⁻¹,表现出约4的动力学氘同位素效应(即,在100% D₂O中速率约为200 s⁻¹)。为了研究氘同位素效应开始的动力学,将H₂O中完全还原、溶解的CO结合细胞色素c氧化酶与饱和氧气的D₂O缓冲液以1:5的比例快速混合。在确定的时间段后,用短激光脉冲闪去CO。混合与闪去CO之间的时间在0.04 - 10 s范围内变化。结果表明,对于牛酶,氘同位素效应分别在≤100 ms和约1 s的两个时间窗口内开始。氘同位素效应的缓慢开始表明,F→O转变过程中的限速步骤是质子从一个位点(推测为Glu(I - 286),球形红细菌氨基酸残基编号)向双核中心的内部转移。蛋白质内部该位点的质子/氘核自发平衡较慢(约1 s)。

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