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大肠杆菌GTP酶Era的鸟嘌呤核苷酸结合与交换动力学分析

Analysis of guanine nucleotide binding and exchange kinetics of the Escherichia coli GTPase Era.

作者信息

Sullivan S M, Mishra R, Neubig R R, Maddock J R

机构信息

Department of Biology, University of Michigan, Ann Arbor 48109, USA.

出版信息

J Bacteriol. 2000 Jun;182(12):3460-6. doi: 10.1128/JB.182.12.3460-3466.2000.

Abstract

Era is an essential Escherichia coli guanine nucleotide binding protein that appears to play a number of cellular roles. Although the kinetics of Era guanine nucleotide binding and hydrolysis have been described, guanine nucleotide exchange rates have never been reported. Here we describe a kinetic analysis of guanine nucleotide binding, exchange, and hydrolysis by Era using the fluorescent mant (N-methyl-3'-O-anthraniloyl) guanine nucleotide analogs. The equilibrium binding constants (K(D)) for mGDP and mGTP (0.61 +/- 0. 12 microgM and 3.6 +/- 0.80 microM, respectively) are similar to those of the unmodified nucleotides. The single turnover rates for mGTP hydrolysis by Era were 3.1 +/- 0.2 mmol of mGTP hydrolyzed/min/mol in the presence of 5 mM MgCl(2) and 5.6 +/- 0.3 mmol of mGTP hydrolyzed/min/mol in the presence of 0.2 mM MgCl(2). Moreover, Era associates with and exchanges guanine nucleotide rapidly (on the order of seconds) in both the presence and absence of Mg(2+). We suggest that models of Era function should reflect the rapid exchange of nucleotides in addition to the GTPase activity inherent to Era.

摘要

Era是一种重要的大肠杆菌鸟嘌呤核苷酸结合蛋白,似乎在细胞中发挥多种作用。尽管已经描述了Era鸟嘌呤核苷酸结合和水解的动力学,但鸟嘌呤核苷酸交换速率从未被报道过。在这里,我们使用荧光mant(N-甲基-3'-O-邻氨基苯甲酰基)鸟嘌呤核苷酸类似物描述了Era对鸟嘌呤核苷酸结合、交换和水解的动力学分析。mGDP和mGTP的平衡结合常数(K(D))(分别为0.61±0.12μM和3.6±0.80μM)与未修饰核苷酸的平衡结合常数相似。在存在5 mM MgCl₂的情况下,Era水解mGTP的单周转速率为3.1±0.2 mmol mGTP水解/分钟/摩尔,在存在0.2 mM MgCl₂的情况下为5.6±0.3 mmol mGTP水解/分钟/摩尔。此外,无论有无Mg²⁺,Era都能快速(在几秒的量级)结合和交换鸟嘌呤核苷酸。我们认为,Era功能模型除了应反映Era固有的GTPase活性外,还应反映核苷酸的快速交换。

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