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柠檬酸盐诱导型citMCDEFGRP操纵子的转录调控,该操纵子编码参与副干酪乳杆菌柠檬酸盐发酵的基因。

Transcriptional control of the citrate-inducible citMCDEFGRP operon, encoding genes involved in citrate fermentation in Leuconostoc paramesenteroides.

作者信息

Martín M, Magni C, López P, de Mendoza D

机构信息

Instituto de Biología Molecular y Celular de Rosario and Departamento de Microbiología, Universidad Nacional de Rosario, Argentina.

出版信息

J Bacteriol. 2000 Jul;182(14):3904-12. doi: 10.1128/JB.182.14.3904-3912.2000.

DOI:10.1128/JB.182.14.3904-3912.2000
PMID:10869065
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC94572/
Abstract

In this study we describe the expression pattern of the Leuconostoc paramesenteroides citMCDEFGRP operon in response to the addition of citrate to the growth medium. An 8.8-kb polycistronic transcript, which includes the citMCDEFGRP genes, was identified; its synthesis was dramatically induced upon addition of citrate to the growth medium. We also found that expression of the cit operon is subjected to posttranscriptional regulation, since processing sites included in four complex secondary structures (I, II, III, and IV) were identified by Northern blot analysis and mapped by primer extension. Upstream of the citMCDEFGRP operon a divergent open reading frame, whose expression was also increased by citrate, was identified by DNA sequencing and designated citI. The start and end sites of transcription of the cit operon and citI gene were mapped. The start sites are separated by a stretch of 188 bp with a very high A+T content of 77% and are preceded by transcriptional promoters. The end sites of the transcripts are located next to the 3' end of two secondary structures characteristic of rho-independent transcriptional terminators. The effect of the citI gene on expression of the cit operon was studied in Escherichia coli. The presence of the citI gene in cis and in trans resulted in increased activity of the cit promoter. These data provide the first evidence that citrate fermentation in Leuconostoc is regulated at the transcriptional level by a transcriptional activator rather than by a repressor.

摘要

在本研究中,我们描述了副干酪乳杆菌citMCDEFGRP操纵子在向生长培养基中添加柠檬酸盐时的表达模式。鉴定出了一个包含citMCDEFGRP基因的8.8 kb多顺反子转录本;在向生长培养基中添加柠檬酸盐后,其合成被显著诱导。我们还发现cit操纵子的表达受到转录后调控,因为通过Northern印迹分析鉴定出了四个复杂二级结构(I、II、III和IV)中包含的加工位点,并通过引物延伸进行了定位。通过DNA测序在citMCDEFGRP操纵子上游鉴定出一个 divergent 开放阅读框,其表达也因柠檬酸盐而增加,并将其命名为citI。绘制了cit操纵子和citI基因转录的起始和终止位点。起始位点被一段188 bp的序列隔开,该序列的A+T含量非常高,为77%,并且前面有转录启动子。转录本的终止位点位于两个不依赖ρ的转录终止子特征性二级结构的3'端附近。在大肠杆菌中研究了citI基因对cit操纵子表达的影响。citI基因的顺式和反式存在导致cit启动子活性增加。这些数据提供了第一个证据,即副干酪乳杆菌中的柠檬酸盐发酵在转录水平上由转录激活因子而非阻遏因子调控。

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本文引用的文献

1
Genetic organization of the citCDEF locus and identification of mae and clyR genes from Leuconostoc mesenteroides.嗜柠檬酸明串珠菌citCDEF基因座的遗传组织以及mae和clyR基因的鉴定
J Bacteriol. 1999 Jul;181(14):4411-6. doi: 10.1128/JB.181.14.4411-4416.1999.
2
Cloning and molecular characterization of the citrate utilization citMCDEFGRP cluster of Leuconostoc paramesenteroides.副干酪乳杆菌柠檬酸盐利用citMCDEFGRP基因簇的克隆与分子特征分析
FEMS Microbiol Lett. 1999 May 15;174(2):231-8. doi: 10.1111/j.1574-6968.1999.tb13573.x.
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Mechanism of citrate metabolism in Lactococcus lactis: resistance against lactate toxicity at low pH.乳酸乳球菌中柠檬酸代谢的机制:在低pH值下对乳酸毒性的抗性。
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The Escherichia coli citrate carrier CitT: a member of a novel eubacterial transporter family related to the 2-oxoglutarate/malate translocator from spinach chloroplasts.大肠杆菌柠檬酸载体CitT:一种与菠菜叶绿体中2-氧代戊二酸/苹果酸转运体相关的新型真细菌转运蛋白家族的成员。
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The citrate transport system of Lactococcus lactis subsp. lactis biovar diacetylactis is induced by acid stress.乳酸乳球菌乳亚种双乙酰亚种的柠檬酸盐转运系统由酸胁迫诱导。
Appl Environ Microbiol. 1998 Mar;64(3):850-7. doi: 10.1128/AEM.64.3.850-857.1998.
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Purification of Leuconostoc mesenteroides citrate lyase and cloning and characterization of the citCDEFG gene cluster.嗜柠檬酸明串珠菌柠檬酸裂解酶的纯化及citCDEFG基因簇的克隆与鉴定
J Bacteriol. 1998 Feb;180(3):647-54. doi: 10.1128/JB.180.3.647-654.1998.
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The ProDom database of protein domain families.蛋白质结构域家族的ProDom数据库。
Nucleic Acids Res. 1998 Jan 1;26(1):323-6. doi: 10.1093/nar/26.1.323.
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J Mol Biol. 1997 Jun 27;269(5):719-31. doi: 10.1006/jmbi.1997.1076.
10
Proton motive force generation by citrolactic fermentation in Leuconostoc mesenteroides.肠系膜明串珠菌中柠檬酸乳酸发酵产生质子动力。
J Bacteriol. 1996 Apr;178(8):2178-85. doi: 10.1128/jb.178.8.2178-2185.1996.