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1
Some details of the reaction mechanism of glucoamylase from Aspergillus niger--kinetic and structural studies on Trp52-->Phe and Trp317-->Phe mutants.黑曲霉葡糖淀粉酶反应机制的一些细节——色氨酸52→苯丙氨酸和色氨酸317→苯丙氨酸突变体的动力学和结构研究
Eur J Biochem. 1997 Dec 15;250(3):638-45. doi: 10.1111/j.1432-1033.1997.00638.x.
2
Solvent and viscosity effects on the rate-limiting product release step of glucoamylase during maltose hydrolysis.溶剂和粘度对麦芽糖水解过程中糖化酶限速产物释放步骤的影响。
Biotechnol Prog. 1997 Sep-Oct;13(5):601-8. doi: 10.1021/bp9700824.
3
Identification of enzyme-substrate and enzyme-product complexes in the catalytic mechanism of glucoamylase from Aspergillus awamori.泡盛曲霉糖化酶催化机制中酶-底物复合物和酶-产物复合物的鉴定
Biochemistry. 1996 Dec 3;35(48):15269-79. doi: 10.1021/bi961355r.
4
Substrate binding mechanism of Glu180-->Gln, Asp176-->Asn, and wild-type glucoamylases from Aspergillus niger.黑曲霉中Glu180→Gln、Asp176→Asn突变型和野生型葡糖淀粉酶的底物结合机制
Biochemistry. 1996 Nov 26;35(47):15009-18. doi: 10.1021/bi9608323.
5
Structure and energetics of the glucoamylase-isomaltose transition-state complex probed by using modeling and deoxygenated substrates coupled with site-directed mutagenesis.通过建模、使用脱氧底物并结合定点诱变对葡萄糖淀粉酶-异麦芽糖过渡态复合物的结构与能量学进行探究。
J Mol Biol. 1996 Oct 18;263(1):79-89. doi: 10.1006/jmbi.1996.0557.
6
Crystallographic complexes of glucoamylase with maltooligosaccharide analogs: relationship of stereochemical distortions at the nonreducing end to the catalytic mechanism.葡糖淀粉酶与麦芽寡糖类似物的晶体复合物:非还原端立体化学畸变与催化机制的关系。
Biochemistry. 1996 Jun 25;35(25):8319-28. doi: 10.1021/bi960321g.
7
Catalytic mechanism of glucoamylase probed by mutagenesis in conjunction with hydrolysis of alpha-D-glucopyranosyl fluoride and maltooligosaccharides.通过诱变结合α-D-吡喃葡萄糖基氟化物和麦芽寡糖水解对葡萄糖淀粉酶催化机制的研究
Biochemistry. 1996 Feb 13;35(6):1865-71. doi: 10.1021/bi951738+.
8
Structures and mechanisms of glycosyl hydrolases.糖基水解酶的结构与作用机制。
Structure. 1995 Sep 15;3(9):853-9. doi: 10.1016/S0969-2126(01)00220-9.
9
Production, purification and characterization of the catalytic domain of glucoamylase from Aspergillus niger.黑曲霉葡糖淀粉酶催化结构域的生产、纯化及特性分析
Biochem J. 1993 May 15;292 ( Pt 1)(Pt 1):197-202. doi: 10.1042/bj2920197.
10
Activity modulation of the fast and slow isozymes of human cytosolic low-molecular-weight acid phosphatase (ACP1) by purines.嘌呤对人胞质低分子量酸性磷酸酶(ACP1)快慢同工酶的活性调节
Biochim Biophys Acta. 1993 Mar 26;1162(3):275-82. doi: 10.1016/0167-4838(93)90291-x.

黑曲霉葡糖淀粉酶G1催化麦芽糖水解快速步骤的pH依赖性

pH-dependence of the fast step of maltose hydrolysis catalysed by glucoamylase G1 from Aspergillus niger.

作者信息

Christensen U

机构信息

Kemisk Laboratorium IV, Universitetsparken 5, DK-2100 Copenhagen, Denmark.

出版信息

Biochem J. 2000 Jul 15;349(Pt 2):623-8. doi: 10.1042/0264-6021:3490623.

DOI:10.1042/0264-6021:3490623
PMID:10880362
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1221186/
Abstract

The presteady-state kinetic parameters of the interaction ofwild-type glucoamylase from Aspergillus niger (EC 3.2.1.3)with maltose were obtained and analysed in the pH range 3-7 withintervals of 0.25 pH units. In all cases the following three-step reaction scheme was found to apply. [Equation: see text]. The general result of the analysis of the presteady-state kinetics is that glucoamylase G1 is affected by the protonation states of three groups, with pK(a) values of 2.7, 4.5 and 5.7 in the free enzyme and of 2.7, 4.75 and 6.5 in the first enzyme-substrate complex. The protonation of the group in the enzyme-substrate complex with a pK(a) 6.5 hadno effect on k(2) (1640 s(-1)) or k(-2) (20+/-4 s(-1)), but resulted in a stronger enzyme-substrate interaction, due to a decrease of K(1) from 40 to 6.3 mM. In other words,when the substrate is bound, the pK(a) of the acidgroup changes to increase the fraction of reactive enzyme. Since this pK(a) parallels that of the Michaelis complex, known from the pH-dependence of k(cat), the group in question is most probably the catalytic acid Glu-179. Protonation of Glu-179 thus is of no importance in the second step, clearly indicating that this step represents a conformational change and not the actual hydrolysis step of the reaction. Protonation of the pK(a)=4.75 group leads to a small decrease in k(2) to 1090 s(-1), and also to minor changes in K(1). The group with pK(a)=2.7 leads toa major decrease of k(2), of which the limit may bezero, but shows no effect on K(1). Thus no differenceis seen between the pK(a) values of the free enzymeand of the first enzyme-substrate complex at low pH.

摘要

获得了黑曲霉野生型葡糖淀粉酶(EC 3.2.1.3)与麦芽糖相互作用的预稳态动力学参数,并在pH值范围为3至7、间隔为0.25个pH单位的条件下进行了分析。在所有情况下,均发现以下三步反应方案适用。[方程式:见正文]。预稳态动力学分析的总体结果是,葡糖淀粉酶G1受三个基团质子化状态的影响,游离酶中pK(a)值分别为2.7、4.5和5.7,在第一个酶 - 底物复合物中分别为2.7、4.75和6.5。酶 - 底物复合物中pK(a)为6.5的基团的质子化对k(2)(1640 s⁻¹)或k(-2)(20±4 s⁻¹)没有影响,但由于K(1)从40 mM降至6.3 mM,导致酶 - 底物相互作用增强。换句话说,当底物结合时,酸性基团的pK(a)发生变化,以增加活性酶的比例。由于该pK(a)与从k(cat)的pH依赖性已知的米氏复合物的pK(a)平行,所以所讨论的基团很可能是催化性酸Glu - 179。因此,Glu - 179的质子化在第二步中并不重要,这清楚地表明该步骤代表构象变化,而不是反应的实际水解步骤。pK(a)=4.75基团的质子化导致k(2)略有下降至1090 s⁻¹,并且K(1)也有微小变化。pK(a)=2.7的基团导致k(2)大幅下降,其极限可能为零,但对K(1)没有影响。因此,在低pH下游离酶和第一个酶 - 底物复合物的pK(a)值之间没有差异。