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肌红蛋白的O(2)结合口袋:一个保守亮氨酸的作用。

The O(2) binding pocket of myohemerythrin: role of a conserved leucine.

作者信息

Xiong J, Phillips R S, Kurtz D M, Jin S, Ai J, Sanders-Loehr J

机构信息

Department of Chemistry, University of Georgia, Athens 30602-2556, USA.

出版信息

Biochemistry. 2000 Jul 25;39(29):8526-36. doi: 10.1021/bi9929397.

Abstract

A conserved O(2) binding pocket residue in Phascolopsis gouldii myohemerythrin (myoHr), namely, L104, was mutated to several other residues, and the effects on O(2) association and dissociation rates, O(2) affinity, and autoxidation were examined. The L104V, -F, and -Y myoHrs formed stable O(2) adducts whose UV-vis and resonance Raman spectra closely matched those of wild-type oxymyoHr. The L104V mutation produced only minimal effects on either O(2) association or dissociation, whereas the L104F and -Y mutations resulted in 100-300-fold decreases in both O(2) association and dissociation rates. These decreases are attributed to introduction of steric restrictions into the O(2) binding pocket, which are not present in either wild-type or L104V myoHrs. The failure to observe increased O(2) association or dissociation rates for L104V indicates that the side chain of leucine at position 104 does not sterically "gate" O(2) entry into or exit from the binding pocket in the rate-determining step(s). L104V myoHr autoxidized approximately 3 times faster than did wild type, whereas L104T autoxidized >10(6) times faster than did wild type. The latter large increase is attributed to increased side chain polarity, thereby increasing water occupancy in the oxymyoHr binding pocket. These results indicate that L104 contributes a hydrophobic barrier that restricts water entry into the oxymyoHr binding pocket. Thus, a leucine at position 104 in myoHr appears to have the optimal combination of size and hydrophobicity to facilitate O(2) binding while simultaneously inhibiting autoxidation.

摘要

在古尔德氏袋形海鞘肌红蛋白(myoHr)中,一个保守的氧结合口袋残基,即L104,被突变为其他几个残基,并研究了其对氧结合和解离速率、氧亲和力及自氧化的影响。L104V、-F和-Y型肌红蛋白形成了稳定的氧加合物,其紫外可见光谱和共振拉曼光谱与野生型氧合肌红蛋白的光谱紧密匹配。L104V突变对氧结合或解离的影响极小,而L104F和-Y突变导致氧结合和解离速率均下降100 - 300倍。这些下降归因于在氧结合口袋中引入了空间限制,而野生型或L104V型肌红蛋白中不存在这种限制。未观察到L104V的氧结合或解离速率增加,这表明104位亮氨酸的侧链在速率决定步骤中不会在空间上“控制”氧进入或离开结合口袋。L104V型肌红蛋白的自氧化速度比野生型快约3倍,而L104T型肌红蛋白的自氧化速度比野生型快>10^6倍。后一种大幅增加归因于侧链极性增加,从而增加了氧合肌红蛋白结合口袋中的水占有率。这些结果表明,L104提供了一个疏水屏障,限制水进入氧合肌红蛋白结合口袋。因此,肌红蛋白中104位的亮氨酸似乎具有大小和疏水性的最佳组合,既能促进氧结合,又能同时抑制自氧化。

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