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含铁脲酶

Iron-Containing Ureases.

作者信息

Proshlyakov Denis A, Farrugia Mark A, Proshlyakov Yegor D, Hausinger Robert P

机构信息

Department of Physiology, Michigan State University, Michigan State University, East Lansing, Michigan 48824, United States.

Department of Chemistry, Michigan State University, Michigan State University, East Lansing, Michigan 48824, United States.

出版信息

Coord Chem Rev. 2021 Dec 1;448. doi: 10.1016/j.ccr.2021.214190. Epub 2021 Sep 9.

DOI:10.1016/j.ccr.2021.214190
PMID:35250039
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8896516/
Abstract

Conventional ureases possess dinuclear nickel active sites that are oxygen-stable and require a set of accessory proteins for metallocenter biosynthesis. By contrast, oxygen-labile ureases have active sites containing dual ferrous ions and lack a requirement for maturation proteins. The structures of the two types of urease are remarkably similar, with an active site architecture that includes two imidazoles and a carboxylate ligand coordinated to one metal, two imidazoles coordinated to the second metal, and a metal-bridging carbamylated lysine ligand. The electronic spectrum of the diferric form of the enzyme resembles that of methemerythrin. Resonance Raman spectroscopic analyses confirm the presence of a μ-oxo ligand and indicate the presence of one or more terminal solvent ligands.

摘要

传统脲酶具有双核镍活性位点,这些位点对氧稳定,且金属中心生物合成需要一组辅助蛋白。相比之下,对氧不稳定的脲酶具有含双亚铁离子的活性位点,且不需要成熟蛋白。这两种类型的脲酶结构非常相似,其活性位点结构包括两个咪唑和一个与一种金属配位的羧酸盐配体、两个与第二种金属配位的咪唑,以及一个金属桥连的氨甲酰化赖氨酸配体。该酶的二铁形式的电子光谱类似于高铁肌红蛋白的电子光谱。共振拉曼光谱分析证实了μ-氧配体的存在,并表明存在一个或多个末端溶剂配体。

相似文献

1
Iron-Containing Ureases.含铁脲酶
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2
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Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.产气克雷伯菌脲酶变体缺乏氨甲酰化赖氨酸镍配体的化学拯救
Biochemistry. 1998 Apr 28;37(17):6214-20. doi: 10.1021/bi980021u.
4
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5
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Apoprotein isolation and activation, and vibrational structure of the Helicobacter mustelae iron urease.幽门螺旋杆菌铁尿素酶的载脂蛋白分离与激活,以及振动结构。
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本文引用的文献

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Diversity of structures and functions of oxo-bridged non-heme diiron proteins.氧桥非血红素双铁蛋白的结构和功能多样性。
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Correction to: The structure-based reaction mechanism of urease, a nickel dependent enzyme: tale of a long debate.对《脲酶的基于结构的反应机制,一种镍依赖性酶:一场长期争论的故事》的修正
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Cryo-EM structure of Helicobacter pylori urease with an inhibitor in the active site at 2.0 Å resolution.
多相有机催化:脯氨酸的实例
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Photocontrolled Release of Urea Enables the Detection of Urea-Urease Intermediates by Cryo-FTIR.尿素的光控释放可通过低温傅里叶变换红外光谱法检测尿素-脲酶中间体。
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Nat Commun. 2020 Oct 9;11(1):5101. doi: 10.1038/s41467-020-18870-2.
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The structure-based reaction mechanism of urease, a nickel dependent enzyme: tale of a long debate.脲酶的基于结构的反应机制,一种镍依赖性酶:漫长争论的故事。
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The Structure of the Elusive Urease-Urea Complex Unveils the Mechanism of a Paradigmatic Nickel-Dependent Enzyme. elusive 脲酶-尿素复合物的结构揭示了典范镍依赖性酶的机制。
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A Structural Model of the Urease Activation Complex Derived from Ion Mobility-Mass Spectrometry and Integrative Modeling.基于离子淌度-质谱联用和整合建模的脲酶激活复合物结构模型。
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Diiron monooxygenases in natural product biosynthesis.天然产物生物合成中的二铁单加氧酶。
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Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.非血红素二铁酶的分子氧活化:多样的双氧加合物、高价态中间体和相关模型配合物。
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