• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Molecular spectroscopy and dynamics of intrinsically fluorescent proteins: coral red (dsRed) and yellow (Citrine).内在荧光蛋白的分子光谱与动力学:珊瑚红(dsRed)和黄色荧光蛋白(Citrine)
Proc Natl Acad Sci U S A. 2000 Oct 24;97(22):11996-2001. doi: 10.1073/pnas.97.22.11996.
2
Kinetic analysis of maturation and denaturation of DsRed, a coral-derived red fluorescent protein.源自珊瑚的红色荧光蛋白DsRed成熟与变性的动力学分析
Biochemistry (Mosc). 2001 Dec;66(12):1342-51. doi: 10.1023/a:1013325627378.
3
Single-molecule fluorescence lifetime and anisotropy measurements of the red fluorescent protein, DsRed, in solution.溶液中红色荧光蛋白DsRed的单分子荧光寿命和各向异性测量。
Photochem Photobiol. 2003 Apr;77(4):362-9. doi: 10.1562/0031-8655(2003)077<0362:sflaam>2.0.co;2.
4
Fluorescence correlation spectroscopy reveals fast optical excitation-driven intramolecular dynamics of yellow fluorescent proteins.荧光相关光谱揭示了黄色荧光蛋白由光激发驱动的快速分子内动力学。
Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):151-6. doi: 10.1073/pnas.97.1.151.
5
Identification of different emitting species in the red fluorescent protein DsRed by means of ensemble and single-molecule spectroscopy.通过系综光谱和单分子光谱法鉴定红色荧光蛋白DsRed中的不同发光物种。
Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14398-403. doi: 10.1073/pnas.251532698. Epub 2001 Nov 27.
6
Red fluorescent protein from Discosoma as a fusion tag and a partner for fluorescence resonance energy transfer.来自盘基网柄菌的红色荧光蛋白作为融合标签及荧光共振能量转移的伙伴。
Biochemistry. 2001 Feb 27;40(8):2502-10. doi: 10.1021/bi002263b.
7
The structure of the chromophore within DsRed, a red fluorescent protein from coral.来自珊瑚的红色荧光蛋白DsRed内发色团的结构。
Proc Natl Acad Sci U S A. 2000 Oct 24;97(22):11990-5. doi: 10.1073/pnas.97.22.11990.
8
The nature of fluorescence emission in the red fluorescent protein DsRed, revealed by single-molecule detection.通过单分子检测揭示红色荧光蛋白DsRed中荧光发射的本质。
Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14392-7. doi: 10.1073/pnas.251525598. Epub 2001 Nov 27.
9
New insights into the photophysics of DsRed by multiparameter spectroscopy on single proteins.通过对单个蛋白质进行多参数光谱分析获得的关于DsRed光物理性质的新见解。
J Phys Chem B. 2008 Jun 26;112(25):7669-74. doi: 10.1021/jp7114753. Epub 2008 Jun 4.
10
Denaturation and partial renaturation of a tightly tetramerized DsRed protein under mildly acidic conditions.在轻度酸性条件下紧密四聚化的DsRed蛋白的变性和部分复性。
FEBS Lett. 2000 Dec 29;487(2):203-8. doi: 10.1016/s0014-5793(00)02344-9.

引用本文的文献

1
Optogenetic elevation of postsynaptic cGMP in the hippocampal dentate gyrus enhances LTP and modifies mouse behaviors.海马齿状回中突触后环磷酸鸟苷的光遗传学升高增强了长时程增强并改变了小鼠行为。
Front Mol Neurosci. 2024 Nov 26;17:1479360. doi: 10.3389/fnmol.2024.1479360. eCollection 2024.
2
Transport-of-intensity phase imaging using commercially available confocal microscope.利用商用共聚焦显微镜进行强度相位成像传输。
J Biomed Opt. 2024 Nov;29(11):116002. doi: 10.1117/1.JBO.29.11.116002. Epub 2024 Nov 7.
3
Ampholytic Peptides Consisting of an Alternating Lysine/Glutamic Acid Sequence for the Simultaneous Formation of Polyion Complex Vesicles.由赖氨酸/谷氨酸交替序列组成的两性肽用于同时形成聚离子复合囊泡。
ACS Polym Au. 2024 May 29;4(4):320-330. doi: 10.1021/acspolymersau.4c00029. eCollection 2024 Aug 14.
4
A Light in the Dark: Uncovering Wolbachia-Host Interactions Using Fluorescence Imaging.黑暗中的光芒:利用荧光成像技术揭示沃尔巴克氏体-宿主相互作用。
Methods Mol Biol. 2024;2739:349-373. doi: 10.1007/978-1-0716-3553-7_21.
5
Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation.荧光蛋白寿命报告胚胎干细胞分化过程中核凝聚物的密度和相。
Nat Commun. 2023 Aug 12;14(1):4885. doi: 10.1038/s41467-023-40647-6.
6
An Efficient Green Fluorescent Protein for Stimulated Emission Depletion Super-Resolution Microscopy.一种高效的绿色荧光蛋白,用于受激发射损耗超分辨率显微镜。
Int J Mol Sci. 2022 Feb 24;23(5):2482. doi: 10.3390/ijms23052482.
7
Molecular Brightness Approach for FRET Analysis of Donor-Linker-Acceptor Constructs at the Single Molecule Level: A Concept.单分子水平下供体-连接体-受体构建体荧光共振能量转移分析的分子亮度方法:一种概念
Front Mol Biosci. 2021 Sep 14;8:730394. doi: 10.3389/fmolb.2021.730394. eCollection 2021.
8
Fluorescence depolarization dynamics of ionic strength sensors using time-resolved anisotropy.基于时间分辨各向异性的离子强度传感器的荧光偏振动力学。
Biophys J. 2021 Apr 20;120(8):1417-1430. doi: 10.1016/j.bpj.2021.01.035. Epub 2021 Feb 12.
9
cAMP Biosensors Based on Genetically Encoded Fluorescent/Luminescent Proteins.基于遗传编码荧光/发光蛋白的 cAMP 生物传感器。
Biosensors (Basel). 2021 Jan 31;11(2):39. doi: 10.3390/bios11020039.
10
Substitutional landscape of a split fluorescent protein fragment using high-density peptide microarrays.利用高密度肽微阵列分析分裂荧光蛋白片段的替换图谱。
PLoS One. 2021 Feb 3;16(2):e0241461. doi: 10.1371/journal.pone.0241461. eCollection 2021.

本文引用的文献

1
The structure of the chromophore within DsRed, a red fluorescent protein from coral.来自珊瑚的红色荧光蛋白DsRed内发色团的结构。
Proc Natl Acad Sci U S A. 2000 Oct 24;97(22):11990-5. doi: 10.1073/pnas.97.22.11990.
2
Biochemistry, mutagenesis, and oligomerization of DsRed, a red fluorescent protein from coral.来自珊瑚的红色荧光蛋白DsRed的生物化学、诱变及寡聚化
Proc Natl Acad Sci U S A. 2000 Oct 24;97(22):11984-9. doi: 10.1073/pnas.97.22.11984.
3
One- and two-photon excited fluorescence lifetimes and anisotropy decays of green fluorescent proteins.绿色荧光蛋白的单光子和双光子激发荧光寿命及各向异性衰减
Biophys J. 2000 Mar;78(3):1589-98. doi: 10.1016/S0006-3495(00)76711-7.
4
Fluorescence correlation spectroscopy reveals fast optical excitation-driven intramolecular dynamics of yellow fluorescent proteins.荧光相关光谱揭示了黄色荧光蛋白由光激发驱动的快速分子内动力学。
Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):151-6. doi: 10.1073/pnas.97.1.151.
5
Sensitivity of the yellow variant of green fluorescent protein to halides and nitrate.绿色荧光蛋白黄色变体对卤化物和硝酸盐的敏感性。
Curr Biol. 1999 Sep 9;9(17):R628-9. doi: 10.1016/s0960-9822(99)80408-4.
6
Fluorescent proteins from nonbioluminescent Anthozoa species.来自非生物发光珊瑚虫纲物种的荧光蛋白。
Nat Biotechnol. 1999 Oct;17(10):969-73. doi: 10.1038/13657.
7
Dynamic and quantitative Ca2+ measurements using improved cameleons.使用改良型钙指示剂进行动态定量Ca2+测量。
Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):2135-40. doi: 10.1073/pnas.96.5.2135.
8
Resolution of fluorescence correlation measurements.荧光相关测量的分辨率
Biophys J. 1999 Mar;76(3):1619-31. doi: 10.1016/S0006-3495(99)77321-2.
9
Dynamics of fluorescence fluctuations in green fluorescent protein observed by fluorescence correlation spectroscopy.通过荧光相关光谱法观察绿色荧光蛋白中荧光涨落的动力学
Proc Natl Acad Sci U S A. 1998 Nov 10;95(23):13573-8. doi: 10.1073/pnas.95.23.13573.
10
The green fluorescent protein.绿色荧光蛋白。
Annu Rev Biochem. 1998;67:509-44. doi: 10.1146/annurev.biochem.67.1.509.

内在荧光蛋白的分子光谱与动力学:珊瑚红(dsRed)和黄色荧光蛋白(Citrine)

Molecular spectroscopy and dynamics of intrinsically fluorescent proteins: coral red (dsRed) and yellow (Citrine).

作者信息

Heikal A A, Hess S T, Baird G S, Tsien R Y, Webb W W

机构信息

School of Applied and Engineering Physics, Cornell University, Clark Hall, Ithaca, NY 14853, USA.

出版信息

Proc Natl Acad Sci U S A. 2000 Oct 24;97(22):11996-2001. doi: 10.1073/pnas.97.22.11996.

DOI:10.1073/pnas.97.22.11996
PMID:11050231
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC17283/
Abstract

Gene expression of intrinsically fluorescent proteins in biological systems offers new noninvasive windows into cellular function, but optimization of these probes relies on understanding their molecular spectroscopy, dynamics, and structure. Here, the photophysics of red fluorescent protein (dsRed) from discosoma (coral), providing desired longer emission/absorption wavelengths, and an improved yellow fluorescent protein mutant (Citrine) (S65G/V68L/Q69 M/S72A/T203Y) for significant comparison, are characterized by using fluorescence correlation spectroscopy and time-correlated single-photon counting. dsRed fluorescence decays as a single exponential with a 3.65 +/- 0.07-ns time constant, indicating a single emitting state/species independent of pH 4.4-9.0, in contrast with Citrine. However, laser excitation drives reversible fluorescence flicker at 10(3)-10(4) Hz between dark and bright states with a constant partition fraction f(1) = 0.42 +/- 0.06 and quantum yield of approximately 3 x 10(-3). Unlike Citrine (pKa approximately 5.7), pH-dependent proton binding is negligible (pH 3. 9-11) in dsRed. Time-resolved anisotropy of dsRed reveals rapid depolarization (211 +/- 6 ps) plus slow rotational motion (53 +/- 8 ns), in contrast with a single rotational time (16 +/- 2 ns) for Citrine. The molecular dimensions, calculated from rotational and translational diffusion, indicate that dsRed is hydrodynamically 3.8 +/- 0.4 times larger than predicted for a monomer, which suggests an oligomer (possibly a tetramer) configuration even at approximately 10(-9) M. The fast depolarization is attributed to intraoligomer energy transfer between mobile nonparallel chromophores with the initial anisotropy implying a 24 +/- 3 degrees depolarization angle. Large two-photon excitation cross sections ( approximately 100 GM at 990 nm for dsRed and approximately 50 GM at 970 nm for Citrine), advantageous for two-photon-fluorescence imaging in cells, are measured.

摘要

生物系统中固有荧光蛋白的基因表达为细胞功能提供了新的非侵入性观察窗口,但这些探针的优化依赖于对其分子光谱、动力学和结构的理解。在这里,通过荧光相关光谱和时间相关单光子计数对来自盘珊瑚(珊瑚)的红色荧光蛋白(dsRed)的光物理性质进行了表征,该蛋白具有所需的更长发射/吸收波长,还对一种经过改进的黄色荧光蛋白突变体(柠檬黄)(S65G/V68L/Q69M/S72A/T203Y)进行了显著比较。dsRed荧光以3.65±0.07纳秒的时间常数呈单指数衰减,表明存在一个独立于pH 4.4 - 9.0的单一发射态/物种,这与柠檬黄不同。然而,激光激发会在暗态和亮态之间以10³ - 10⁴赫兹的频率驱动可逆荧光闪烁,其恒定分配分数f(1)=0.42±0.06,量子产率约为3×10⁻³。与柠檬黄(pKa约为5.7)不同,dsRed中pH依赖的质子结合在pH 3.9 - 11时可忽略不计。dsRed的时间分辨各向异性显示出快速去极化(211±6皮秒)加上缓慢的旋转运动(53±8纳秒),而柠檬黄只有单一的旋转时间(16±2纳秒)。根据旋转和平移扩散计算出的分子尺寸表明,dsRed的流体动力学尺寸比单体预测值大3.8±0.4倍。这表明即使在约10⁻⁹摩尔浓度下,dsRed也呈寡聚体(可能是四聚体)构型。快速去极化归因于移动的非平行发色团之间的寡聚体内能量转移,初始各向异性意味着去极化角度为24±3度。测量了较大的双光子激发截面(dsRed在990纳米处约为100 GM,柠檬黄在970纳米处约为50 GM),这有利于细胞中的双光子荧光成像。