• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

编码粘康酸环异构酶的基因catB发生突变,会激活远端ben基因的转录,并参与不动杆菌ADP1菌株的复杂调控回路。

Mutations in catB, the gene encoding muconate cycloisomerase, activate transcription of the distal ben genes and contribute to a complex regulatory circuit in Acinetobacter sp. strain ADP1.

作者信息

Cosper N J, Collier L S, Clark T J, Scott R A, Neidle E L

机构信息

Center for Metalloenzyme Studies, University of Georgia, Athens, Georgia 30602, USA.

出版信息

J Bacteriol. 2000 Dec;182(24):7044-52. doi: 10.1128/JB.182.24.7044-7052.2000.

DOI:10.1128/JB.182.24.7044-7052.2000
PMID:11092867
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC94832/
Abstract

Mutants of the bacterium Acinetobacter sp. strain ADP1 were selected to grow on benzoate without the BenM transcriptional activator. In the wild type, BenM responds to benzoate and cis,cis-muconate to activate expression of the benABCDE operon, which is involved in benzoate catabolism. This operon encodes enzymes that convert benzoate to catechol, a compound subsequently degraded by cat gene-encoded enzymes. In this report, four spontaneous mutants were found to carry catB mutations that enabled BenM-independent growth on benzoate. catB encodes muconate cycloisomerase, an enzyme required for benzoate catabolism. Its substrate, cis,cis-muconate, is enzymatically produced from catechol by the catA-encoded catechol 1,2-dioxygenase. Muconate cycloisomerase was purified to homogeneity from the wild type and the catB mutants. Each purified enzyme was active, although there were differences in the catalytic properties of the wild type and variant muconate cycloisomerases. Strains with a chromosomal benA::lacZ transcriptional fusion were constructed and used to investigate how catB mutations affect growth on benzoate. All of the catB mutations increased cis,cis-muconate-activated ben gene expression in strains lacking BenM. A model is presented in which the catB mutations reduce muconate cycloisomerase activity during growth on benzoate, thereby increasing intracellular cis, cis-muconate concentrations. This, in turn, may allow CatM, an activator similar to BenM in sequence and function, to activate ben gene transcription. CatM normally responds to cis,cis-muconate to activate cat gene expression. Consistent with this model, muconate cylcoisomerase specific activities in cell extracts of benzoate-grown catB mutants were low relative to that of the wild type. Moreover, the catechol 1,2-dioxygenase activities of the mutants were elevated, which may result from CatM responding to the altered intracellular levels of cis,cis-muconate and increasing catA expression. Collectively, these results support the important role of metabolite concentrations in controlling benzoate degradation via a complex transcriptional regulatory circuit.

摘要

筛选出不动杆菌属ADP1菌株的突变体,使其在没有BenM转录激活因子的情况下利用苯甲酸盐生长。在野生型中,BenM对苯甲酸盐和顺,顺-粘康酸作出反应,以激活benABCDE操纵子的表达,该操纵子参与苯甲酸盐的分解代谢。这个操纵子编码将苯甲酸盐转化为儿茶酚的酶,儿茶酚是一种随后由cat基因编码的酶降解的化合物。在本报告中,发现四个自发突变体携带catB突变,这些突变使得它们能够在没有BenM的情况下利用苯甲酸盐生长。catB编码粘康酸环异构酶,这是苯甲酸盐分解代谢所需的一种酶。其底物顺,顺-粘康酸是由catA编码的儿茶酚1,2-双加氧酶从儿茶酚酶促产生的。从野生型和catB突变体中纯化出均一的粘康酸环异构酶。每种纯化的酶都有活性,尽管野生型和变异型粘康酸环异构酶的催化特性存在差异。构建了具有染色体benA::lacZ转录融合的菌株,并用于研究catB突变如何影响在苯甲酸盐上的生长。所有的catB突变都增加了缺乏BenM的菌株中顺,顺-粘康酸激活的ben基因表达。提出了一个模型,其中catB突变在苯甲酸盐生长过程中降低了粘康酸环异构酶的活性,从而增加了细胞内顺,顺-粘康酸的浓度。反过来,这可能使CatM(一种在序列和功能上与BenM相似的激活因子)激活ben基因转录。CatM通常对顺,顺-粘康酸作出反应以激活cat基因表达。与该模型一致,相对于野生型,在以苯甲酸盐生长的catB突变体细胞提取物中的粘康酸环异构酶比活性较低。此外,突变体的儿茶酚1,2-双加氧酶活性升高,这可能是由于CatM对细胞内顺,顺-粘康酸水平的改变作出反应并增加了catA表达所致。总的来说,这些结果支持了代谢物浓度在通过复杂的转录调控回路控制苯甲酸盐降解中的重要作用。

相似文献

1
Mutations in catB, the gene encoding muconate cycloisomerase, activate transcription of the distal ben genes and contribute to a complex regulatory circuit in Acinetobacter sp. strain ADP1.编码粘康酸环异构酶的基因catB发生突变,会激活远端ben基因的转录,并参与不动杆菌ADP1菌株的复杂调控回路。
J Bacteriol. 2000 Dec;182(24):7044-52. doi: 10.1128/JB.182.24.7044-7052.2000.
2
Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator.赖氨酸R型转录激活因子BenM对不动杆菌属ADP1菌株中苯甲酸降解的调控
J Bacteriol. 1998 May;180(9):2493-501. doi: 10.1128/JB.180.9.2493-2501.1998.
3
CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.拜氏不动杆菌ADP1中CatM对benABCDE操纵子的调控:两个LysR型旁系同源物的功能差异
Appl Environ Microbiol. 2006 Mar;72(3):1749-58. doi: 10.1128/AEM.72.3.1749-1758.2006.
4
The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1.benPK操纵子被认为在转运过程中发挥作用,它是不动杆菌ADP1菌株中苯甲酸分解代谢调节子的一部分。
Microbiology (Reading). 2002 Apr;148(Pt 4):1213-1223. doi: 10.1099/00221287-148-4-1213.
5
Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1.拜氏不动杆菌ADP1中LysR型转录调节因子BenM的诱导物反应
Mol Microbiol. 2009 May;72(4):881-94. doi: 10.1111/j.1365-2958.2009.06686.x. Epub 2009 Apr 8.
6
Characterization of Acinetobacter calcoaceticus catM, a repressor gene homologous in sequence to transcriptional activator genes.醋酸钙不动杆菌catM的特性研究,catM是一个在序列上与转录激活基因同源的阻遏基因。
J Bacteriol. 1989 Oct;171(10):5410-21. doi: 10.1128/jb.171.10.5410-5421.1989.
7
Distinct effector-binding sites enable synergistic transcriptional activation by BenM, a LysR-type regulator.不同的效应物结合位点可实现由LysR型调控因子BenM介导的协同转录激活。
J Mol Biol. 2007 Mar 30;367(3):616-29. doi: 10.1016/j.jmb.2006.09.090. Epub 2006 Oct 4.
8
catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus.catM编码一种LysR型转录激活因子,调控乙酸钙不动杆菌中儿茶酚的降解。
J Bacteriol. 1995 Oct;177(20):5891-8. doi: 10.1128/jb.177.20.5891-5898.1995.
9
Transcriptional cross-regulation of the catechol and protocatechuate branches of the beta-ketoadipate pathway contributes to carbon source-dependent expression of the Acinetobacter sp. strain ADP1 pobA gene.β-酮己二酸途径中儿茶酚和原儿茶酸分支的转录交叉调控有助于不动杆菌属ADP1菌株pobA基因的碳源依赖性表达。
Appl Environ Microbiol. 2003 Mar;69(3):1598-606. doi: 10.1128/AEM.69.3.1598-1606.2003.
10
Crystallization of the effector-binding domains of BenM and CatM, LysR-type transcriptional regulators from Acinetobacter sp. ADP1.不动杆菌属ADP1菌株中LysR型转录调节因子BenM和CatM效应物结合结构域的结晶
Acta Crystallogr D Biol Crystallogr. 2004 Jan;60(Pt 1):105-8. doi: 10.1107/s0907444903021589. Epub 2003 Dec 18.

引用本文的文献

1
Plasmid Backbone Impacts Conjugation Rate, Transconjugant Fitness, and Community Assembly of Genetically Bioaugmented Soil Microbes for PAH Bioremediation.质粒骨架影响用于多环芳烃生物修复的基因增强型土壤微生物的接合率、接合子适应性及群落组装。
ACS Environ Au. 2025 Jan 22;5(2):241-252. doi: 10.1021/acsenvironau.4c00123. eCollection 2025 Mar 19.
2
Engineering CatM, a LysR-Type Transcriptional Regulator, to Respond Synergistically to Two Effectors.工程化 CatM,一种 LysR 型转录调控因子,以协同方式响应两种效应物。
Genes (Basel). 2019 May 31;10(6):421. doi: 10.3390/genes10060421.
3
CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.拜氏不动杆菌ADP1中CatM对benABCDE操纵子的调控:两个LysR型旁系同源物的功能差异
Appl Environ Microbiol. 2006 Mar;72(3):1749-58. doi: 10.1128/AEM.72.3.1749-1758.2006.
4
Differential expression of two catechol 1,2-dioxygenases in Burkholderia sp. strain TH2.伯克霍尔德氏菌属TH2菌株中两种儿茶酚1,2-双加氧酶的差异表达
J Bacteriol. 2002 Oct;184(20):5714-22. doi: 10.1128/JB.184.20.5714-5722.2002.
5
Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134.不同tfd基因对嗜麦芽窄食单胞菌JMP134降解氯代芳烃的重要性。
J Bacteriol. 2002 Aug;184(15):4054-64. doi: 10.1128/JB.184.15.4054-4064.2002.
6
Synergistic transcriptional activation by one regulatory protein in response to two metabolites.一种调节蛋白对两种代谢物产生协同转录激活作用。
Proc Natl Acad Sci U S A. 2002 May 28;99(11):7693-8. doi: 10.1073/pnas.102605799.

本文引用的文献

1
Raster3D: photorealistic molecular graphics.Raster3D:逼真的分子图形。
Methods Enzymol. 1997;277:505-24. doi: 10.1016/s0076-6879(97)77028-9.
2
Structural basis for the activity of two muconate cycloisomerase variants toward substituted muconates.两种粘康酸环异构酶变体对取代粘康酸活性的结构基础。
Proteins. 1999 Jan 1;34(1):125-36.
3
Substrate specificity of and product formation by muconate cycloisomerases: an analysis of wild-type enzymes and engineered variants.粘康酸环异构酶的底物特异性及产物形成:野生型酶和工程变体分析
Appl Environ Microbiol. 1998 Sep;64(9):3290-9. doi: 10.1128/AEM.64.9.3290-3299.1998.
4
Evolution of an enzyme active site: the structure of a new crystal form of muconate lactonizing enzyme compared with mandelate racemase and enolase.一种酶活性位点的进化:己二酸盐内酯化酶新晶体形式的结构与扁桃酸消旋酶和烯醇酶的比较
Proc Natl Acad Sci U S A. 1998 Sep 1;95(18):10396-401. doi: 10.1073/pnas.95.18.10396.
5
Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1.不动杆菌属ADP1菌株中由antABC编码的邻氨基苯甲酸双加氧酶与由benABC编码的苯甲酸双加氧酶之间的相似性。
J Bacteriol. 1998 Sep;180(17):4466-74. doi: 10.1128/JB.180.17.4466-4474.1998.
6
Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator.赖氨酸R型转录激活因子BenM对不动杆菌属ADP1菌株中苯甲酸降解的调控
J Bacteriol. 1998 May;180(9):2493-501. doi: 10.1128/JB.180.9.2493-2501.1998.
7
Novel nuclear magnetic resonance spectroscopy methods demonstrate preferential carbon source utilization by Acinetobacter calcoaceticus.新型核磁共振光谱法证明了醋酸钙不动杆菌对碳源的优先利用。
J Bacteriol. 1996 Dec;178(23):6833-41. doi: 10.1128/jb.178.23.6833-6841.1996.
8
The beta-ketoadipate pathway and the biology of self-identity.β-酮己二酸途径与自我认同的生物学
Annu Rev Microbiol. 1996;50:553-90. doi: 10.1146/annurev.micro.50.1.553.
9
catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus.catM编码一种LysR型转录激活因子,调控乙酸钙不动杆菌中儿茶酚的降解。
J Bacteriol. 1995 Oct;177(20):5891-8. doi: 10.1128/jb.177.20.5891-5898.1995.
10
The refined X-ray structure of muconate lactonizing enzyme from Pseudomonas putida PRS2000 at 1.85 A resolution.恶臭假单胞菌PRS2000中粘康酸内酯化酶的精细X射线结构,分辨率为1.85埃。
J Mol Biol. 1995 Dec 15;254(5):918-41. doi: 10.1006/jmbi.1995.0666.