Keenleyside W J, Clarke A J, Whitfield C
Department of Microbiology, University of Guelph, Guelph, Ontario N1G 2W1, Canada.
J Bacteriol. 2001 Jan;183(1):77-85. doi: 10.1128/JB.183.1.77-85.2001.
Synthesis of the O:54 O antigen of Salmonella enterica is initiated by the nonprocessive glycosyl transferase WbbE, assigned to family 2 of the glycosyl transferase enzymes (GT2). GT2 enzymes possess a characteristic N-terminal domain, domain A. Based on structural data from the GT2 representative SpsA (S. J. Charnock and G. J. Davies, Biochemistry 38:6380-6385, 1999), this domain is responsible for nucleotide binding. It possesses two invariant Asp residues, the first forming a hydrogen bond to uracil and the second coordinating a Mn(2+) ion. Site-directed replacement of Asp41 (D41A) of WbbE, the analogue of the first Asp residue of SpsA, revealed that this is not required for activity. WbbE possesses three Asp residues near the position analogous to the second conserved residue. Whereas D95A reduced WbbE activity, activity in D93A and D96A mutants was abrogated, suggesting that either D93 or D96 may coordinate the Mn(2+) ion. Our studies also identified a C-terminal region of sequence conservation in 22 GT2 members, including WbbE. SpsA was not among these. This region is characterized by an ED(Y) motif. The Glu and Asp residues of this motif were individually replaced in WbbE. E180D in WbbE had greatly reduced activity, and an E180Q replacement completely abrogated activity; however, D181E had no effect. E180 is predicted to reside on a turn. Combined with the alignment of the motif with potential catalytic residues in the GT2 enzymes ExoM and SpsA, we speculate that E180 is the catalytic residue of WbbE. Sequence and predicted structural divergence in the catalytic region of GT2 members suggests that this is not a homogeneous family.
肠炎沙门氏菌O:54 O抗原的合成由非连续糖基转移酶WbbE起始,该酶属于糖基转移酶家族2(GT2)。GT2酶具有一个特征性的N端结构域,即结构域A。基于GT2代表性酶SpsA的结构数据(S. J. Charnock和G. J. Davies,《生物化学》38:6380 - 6385,1999),该结构域负责核苷酸结合。它有两个不变的天冬氨酸残基,第一个与尿嘧啶形成氢键,第二个与Mn(2+)离子配位。对WbbE中与SpsA第一个天冬氨酸残基类似的天冬氨酸41(D41A)进行定点替换,结果表明其活性并不需要该残基。WbbE在与第二个保守残基类似的位置附近有三个天冬氨酸残基。虽然D95A降低了WbbE的活性,但D93A和D96A突变体的活性被消除,这表明D93或D96可能与Mn(2+)离子配位。我们的研究还在包括WbbE在内的22个GT2成员中鉴定出一个C端序列保守区域。SpsA不在这些成员之中。该区域的特征是一个ED(Y)基序。在WbbE中分别替换了该基序中的谷氨酸和天冬氨酸残基。WbbE中的E180D活性大幅降低,E180Q替换则完全消除了活性;然而,D * 181E没有影响。预计E180位于一个转角处。结合该基序与GT2酶ExoM和SpsA中潜在催化残基的比对,我们推测E * 180是WbbE的催化残基。GT2成员催化区域的序列和预测结构差异表明这不是一个同质化的家族。