• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Identification of residues involved in catalytic activity of the inverting glycosyl transferase WbbE from Salmonella enterica serovar borreze.鉴定肠炎沙门氏菌波勒泽血清型中转化糖基转移酶WbbE催化活性所涉及的残基。
J Bacteriol. 2001 Jan;183(1):77-85. doi: 10.1128/JB.183.1.77-85.2001.
2
Identification of essential amino acid residues in the Sinorhizobium meliloti glucosyltransferase ExoM.
J Biol Chem. 2000 Oct 6;275(40):31407-13. doi: 10.1074/jbc.M004524200.
3
Analysis of the Topology and Active-Site Residues of WbbF, a Putative O-Polysaccharide Synthase from Salmonella enterica Serovar Borreze.分析来自沙门氏菌血清型博雷泽的假定 O-多糖合成酶 WbbF 的拓扑结构和活性位点残基。
J Bacteriol. 2020 Feb 11;202(5). doi: 10.1128/JB.00625-19.
4
Characterization of Leuconostoc mesenteroides NRRL B-512F dextransucrase (DSRS) and identification of amino-acid residues playing a key role in enzyme activity.嗜柠檬酸明串珠菌NRRL B - 512F葡聚糖蔗糖酶(DSRS)的特性及对酶活性起关键作用的氨基酸残基的鉴定。
Appl Microbiol Biotechnol. 1997 Oct;48(4):465-72. doi: 10.1007/s002530051081.
5
Identification of key amino acid residues in Neisseria polysaccharea amylosucrase.多糖奈瑟菌淀粉蔗糖酶关键氨基酸残基的鉴定
FEBS Lett. 2000 May 26;474(1):33-7. doi: 10.1016/s0014-5793(00)01567-2.
6
Identification of active site residues in glucosylceramide synthase. A nucleotide-binding catalytic motif conserved with processive beta-glycosyltransferases.葡萄糖神经酰胺合酶活性位点残基的鉴定。与持续性β-糖基转移酶保守的核苷酸结合催化基序。
J Biol Chem. 2001 Jul 13;276(28):26492-8. doi: 10.1074/jbc.M102612200. Epub 2001 May 3.
7
A novel pathway for O-polysaccharide biosynthesis in Salmonella enterica serovar Borreze.肠炎沙门氏菌博勒泽血清型中O-多糖生物合成的一条新途径。
J Biol Chem. 1996 Nov 8;271(45):28581-92. doi: 10.1074/jbc.271.45.28581.
8
The catalytic, glycosyl transferase and acyl transferase modules of the cell wall peptidoglycan-polymerizing penicillin-binding protein 1b of Escherichia coli.大肠杆菌细胞壁肽聚糖聚合青霉素结合蛋白1b的催化模块、糖基转移酶模块和酰基转移酶模块。
Mol Microbiol. 1999 Oct;34(2):350-64. doi: 10.1046/j.1365-2958.1999.01612.x.
9
Conserved domains of glycosyltransferases.糖基转移酶的保守结构域。
Glycobiology. 1999 Oct;9(10):961-78. doi: 10.1093/glycob/9.10.961.
10
The fully conserved Asp residue in conserved sequence region I of the alpha-amylase family is crucial for the catalytic site architecture and activity.
FEBS Lett. 2003 Apr 24;541(1-3):47-51. doi: 10.1016/s0014-5793(03)00286-2.

引用本文的文献

1
Detecting Glucose Fluctuations in the N-Glycan Structure.检测 N-聚糖结构中的葡萄糖波动。
ACS Chem Biol. 2021 Nov 19;16(11):2690-2701. doi: 10.1021/acschembio.1c00498. Epub 2021 Nov 2.
2
Processivity in Bacterial Glycosyltransferases.细菌糖基转移酶的连续性。
ACS Chem Biol. 2020 Jan 17;15(1):3-16. doi: 10.1021/acschembio.9b00619. Epub 2019 Dec 11.
3
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach.采用无标记 shotgun 方法描绘鱼源致病性无乳链球菌的泛蛋白组。
BMC Genomics. 2019 Jan 7;20(1):11. doi: 10.1186/s12864-018-5423-1.
4
Identification of the Core Set of Carbon-Associated Genes in a Bioenergy Grassland Soil.生物能源草地土壤中与碳相关基因核心集的鉴定
PLoS One. 2016 Nov 17;11(11):e0166578. doi: 10.1371/journal.pone.0166578. eCollection 2016.
5
Identification of the glucosyltransferase that converts hydroxymethyluracil to base J in the trypanosomatid genome.在锥虫基因组中鉴定将羟甲基尿嘧啶转化为碱基J的葡糖基转移酶。
J Biol Chem. 2014 Jul 18;289(29):20273-82. doi: 10.1074/jbc.M114.579821. Epub 2014 Jun 2.
6
Structure-function features of a Mycoplasma glycolipid synthase derived from structural data integration, molecular simulations, and mutational analysis.基于结构数据整合、分子模拟和突变分析的支原体糖脂合酶的结构-功能特征。
PLoS One. 2013 Dec 3;8(12):e81990. doi: 10.1371/journal.pone.0081990. eCollection 2013.
7
A processive carbohydrate polymerase that mediates bifunctional catalysis using a single active site.一种具有行进性的碳水化合物聚合酶,它使用单个活性位点进行双功能催化。
Biochemistry. 2012 Feb 14;51(6):1148-59. doi: 10.1021/bi201820p. Epub 2012 Feb 3.
8
Identification of residues important for the activity of Haloferax volcanii AglD, a component of the archaeal N-glycosylation pathway.鉴定火烈球菌 AglD 活性的关键残基,AglD 是古菌 N-糖基化途径的一个组成部分。
Archaea. 2010 May 6;2010:315108. doi: 10.1155/2010/315108.
9
Identification of a novel group of putative Arabidopsis thaliana beta-(1,3)-galactosyltransferases.一组新的拟南芥假定β-(1,3)-半乳糖基转移酶的鉴定。
Plant Mol Biol. 2008 Sep;68(1-2):43-59. doi: 10.1007/s11103-008-9351-3. Epub 2008 Jun 12.
10
Membrane topology and roles of Pseudomonas aeruginosa Alg8 and Alg44 in alginate polymerization.铜绿假单胞菌Alg8和Alg44在藻酸盐聚合中的膜拓扑结构及作用
Microbiology (Reading). 2008 Jun;154(Pt 6):1605-1615. doi: 10.1099/mic.0.2007/015305-0.

本文引用的文献

1
Identification of essential amino acid residues in the Sinorhizobium meliloti glucosyltransferase ExoM.
J Biol Chem. 2000 Oct 6;275(40):31407-13. doi: 10.1074/jbc.M004524200.
2
The 1.9 A crystal structure of Escherichia coli MurG, a membrane-associated glycosyltransferase involved in peptidoglycan biosynthesis.大肠杆菌MurG的1.9埃晶体结构,MurG是一种参与肽聚糖生物合成的膜相关糖基转移酶。
Protein Sci. 2000 Jun;9(6):1045-52. doi: 10.1110/ps.9.6.1045.
3
The activity of a putative polyisoprenol-linked sugar translocase (Wzx) involved in Escherichia coli O antigen assembly is independent of the chemical structure of the O repeat.参与大肠杆菌O抗原组装的一种假定的聚异戊二烯连接糖转运酶(Wzx)的活性与O重复序列的化学结构无关。
J Biol Chem. 1999 Dec 3;274(49):35129-38. doi: 10.1074/jbc.274.49.35129.
4
Conserved domains of glycosyltransferases.糖基转移酶的保守结构域。
Glycobiology. 1999 Oct;9(10):961-78. doi: 10.1093/glycob/9.10.961.
5
Crystal structures of the bovine beta4galactosyltransferase catalytic domain and its complex with uridine diphosphogalactose.牛β4-半乳糖基转移酶催化结构域及其与尿苷二磷酸半乳糖复合物的晶体结构。
EMBO J. 1999 Jul 1;18(13):3546-57. doi: 10.1093/emboj/18.13.3546.
6
Structure of the nucleotide-diphospho-sugar transferase, SpsA from Bacillus subtilis, in native and nucleotide-complexed forms.来自枯草芽孢杆菌的核苷酸二磷酸糖转移酶SpsA的天然形式和核苷酸复合形式的结构。
Biochemistry. 1999 May 18;38(20):6380-5. doi: 10.1021/bi990270y.
7
A common motif of eukaryotic glycosyltransferases is essential for the enzyme activity of large clostridial cytotoxins.真核生物糖基转移酶的一个常见基序对大型梭菌细胞毒素的酶活性至关重要。
J Biol Chem. 1998 Jul 31;273(31):19566-72. doi: 10.1074/jbc.273.31.19566.
8
Activity of the yeast MNN1 alpha-1,3-mannosyltransferase requires a motif conserved in many other families of glycosyltransferases.酵母MNN1 α-1,3-甘露糖基转移酶的活性需要一个在许多其他糖基转移酶家族中保守的基序。
Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):7945-50. doi: 10.1073/pnas.95.14.7945.
9
Characterization of the glycosyltransferase enzyme from the Escherichia coli K5 capsule gene cluster and identification and characterization of the glucuronyl active site.大肠杆菌K5荚膜基因簇中糖基转移酶的特性分析以及葡糖醛酸活性位点的鉴定与特性研究
J Biol Chem. 1998 May 8;273(19):11752-7. doi: 10.1074/jbc.273.19.11752.
10
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities.基于氨基酸序列相似性的核苷酸二磷酸糖基转移酶分类
Biochem J. 1997 Sep 15;326 ( Pt 3)(Pt 3):929-39. doi: 10.1042/bj3260929u.

鉴定肠炎沙门氏菌波勒泽血清型中转化糖基转移酶WbbE催化活性所涉及的残基。

Identification of residues involved in catalytic activity of the inverting glycosyl transferase WbbE from Salmonella enterica serovar borreze.

作者信息

Keenleyside W J, Clarke A J, Whitfield C

机构信息

Department of Microbiology, University of Guelph, Guelph, Ontario N1G 2W1, Canada.

出版信息

J Bacteriol. 2001 Jan;183(1):77-85. doi: 10.1128/JB.183.1.77-85.2001.

DOI:10.1128/JB.183.1.77-85.2001
PMID:11114903
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC94852/
Abstract

Synthesis of the O:54 O antigen of Salmonella enterica is initiated by the nonprocessive glycosyl transferase WbbE, assigned to family 2 of the glycosyl transferase enzymes (GT2). GT2 enzymes possess a characteristic N-terminal domain, domain A. Based on structural data from the GT2 representative SpsA (S. J. Charnock and G. J. Davies, Biochemistry 38:6380-6385, 1999), this domain is responsible for nucleotide binding. It possesses two invariant Asp residues, the first forming a hydrogen bond to uracil and the second coordinating a Mn(2+) ion. Site-directed replacement of Asp41 (D41A) of WbbE, the analogue of the first Asp residue of SpsA, revealed that this is not required for activity. WbbE possesses three Asp residues near the position analogous to the second conserved residue. Whereas D95A reduced WbbE activity, activity in D93A and D96A mutants was abrogated, suggesting that either D93 or D96 may coordinate the Mn(2+) ion. Our studies also identified a C-terminal region of sequence conservation in 22 GT2 members, including WbbE. SpsA was not among these. This region is characterized by an ED(Y) motif. The Glu and Asp residues of this motif were individually replaced in WbbE. E180D in WbbE had greatly reduced activity, and an E180Q replacement completely abrogated activity; however, D181E had no effect. E180 is predicted to reside on a turn. Combined with the alignment of the motif with potential catalytic residues in the GT2 enzymes ExoM and SpsA, we speculate that E180 is the catalytic residue of WbbE. Sequence and predicted structural divergence in the catalytic region of GT2 members suggests that this is not a homogeneous family.

摘要

肠炎沙门氏菌O:54 O抗原的合成由非连续糖基转移酶WbbE起始,该酶属于糖基转移酶家族2(GT2)。GT2酶具有一个特征性的N端结构域,即结构域A。基于GT2代表性酶SpsA的结构数据(S. J. Charnock和G. J. Davies,《生物化学》38:6380 - 6385,1999),该结构域负责核苷酸结合。它有两个不变的天冬氨酸残基,第一个与尿嘧啶形成氢键,第二个与Mn(2+)离子配位。对WbbE中与SpsA第一个天冬氨酸残基类似的天冬氨酸41(D41A)进行定点替换,结果表明其活性并不需要该残基。WbbE在与第二个保守残基类似的位置附近有三个天冬氨酸残基。虽然D95A降低了WbbE的活性,但D93A和D96A突变体的活性被消除,这表明D93或D96可能与Mn(2+)离子配位。我们的研究还在包括WbbE在内的22个GT2成员中鉴定出一个C端序列保守区域。SpsA不在这些成员之中。该区域的特征是一个ED(Y)基序。在WbbE中分别替换了该基序中的谷氨酸和天冬氨酸残基。WbbE中的E180D活性大幅降低,E180Q替换则完全消除了活性;然而,D * 181E没有影响。预计E180位于一个转角处。结合该基序与GT2酶ExoM和SpsA中潜在催化残基的比对,我们推测E * 180是WbbE的催化残基。GT2成员催化区域的序列和预测结构差异表明这不是一个同质化的家族。