Ryzhov V, Dunbar R C, Cerda B, Wesdemiotis C
Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106, USA.
J Am Soc Mass Spectrom. 2000 Dec;11(12):1037-46. doi: 10.1016/s1044-0305(00)00181-1.
Na+ and K+ gas-phase affinities of the three aromatic amino acids Phe, Tyr, and Trp were measured by the kinetic method. Na+ binds these amino acids much more strongly than K+, and for both metal ions the binding strength was found to follow the order Phe < or = Tyr < Trp. Quantum chemical calculations by density functional theory (DFT) gave the same qualitative ordering, but suggested a somewhat larger Phe/Trp increment. These results are in acceptable agreement with predictions based on the binding of Na+ and K+ to the side chain model molecules benzene, phenol, and indole, and are also in reasonable agreement with the predictions from purely electrostatic calculations of the side-chain binding effects. The binding energies were compared with those to the aliphatic amino acids glycine and alanine. Binding to the aromatic amino acids was found to be stronger both experimentally and computationally, but the DFT calculations indicate substantially larger increments relative to alanine than shown by the experiments. Possible reasons for this difference are discussed. The metal ion binding energies show the same trends as the proton affinities.
采用动力学方法测定了三种芳香族氨基酸苯丙氨酸(Phe)、酪氨酸(Tyr)和色氨酸(Trp)对Na⁺和K⁺的气相亲和力。Na⁺与这些氨基酸的结合比K⁺强得多,并且对于这两种金属离子,发现结合强度遵循Phe ≤ Tyr < Trp的顺序。通过密度泛函理论(DFT)进行的量子化学计算给出了相同的定性排序,但表明Phe/Trp的增量略大。这些结果与基于Na⁺和K⁺与侧链模型分子苯、苯酚和吲哚的结合所做的预测具有可接受的一致性,并且也与侧链结合效应的纯静电计算预测合理一致。将结合能与脂肪族氨基酸甘氨酸和丙氨酸的结合能进行了比较。发现在实验和计算方面,与芳香族氨基酸的结合都更强,但DFT计算表明相对于丙氨酸的增量比实验显示的要大得多。讨论了造成这种差异的可能原因。金属离子结合能与质子亲和力呈现相同的趋势。