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反硝化细菌芳香陶厄氏菌对3-羟基苯甲酸的厌氧代谢

Anaerobic metabolism of 3-hydroxybenzoate by the denitrifying bacterium Thauera aromatica.

作者信息

Laempe D, Jahn M, Breese K, Schägger H, Fuchs G

机构信息

Mikrobiologie, Institut für Biologie II, Albert-Ludwigs-Universität, Freiburg, Germany.

出版信息

J Bacteriol. 2001 Feb;183(3):968-79. doi: 10.1128/JB.183.3.968-979.2001.

Abstract

The anaerobic metabolism of 3-hydroxybenzoate was studied in the denitrifying bacterium Thauera aromatica. Cells grown with this substrate were adapted to grow with benzoate but not with 4-hydroxybenzoate. Vice versa, 4-hydroxybenzoate-grown cells did not utilize 3-hydroxybenzoate. The first step in 3-hydroxybenzoate metabolism is a coenzyme A (CoA) thioester formation, which is catalyzed by an inducible 3-hydroxybenzoate-CoA ligase. The enzyme was purified and characterized. Further metabolism of 3-hydroxybenzoyl-CoA by cell extract required MgATP and was coupled to the oxidation of 2 mol of reduced viologen dyes per mol of substrate added. Purification of the 3-hydroxybenzoyl-CoA reducing enzyme revealed that this activity was due to benzoyl-CoA reductase, which reduced the 3-hydroxy analogue almost as efficiently as benzoyl-CoA. The further metabolism of the alicyclic dienoyl-CoA product containing the hydroxyl substitution obviously required additional specific enzymes. Comparison of the protein pattern of 3-hydroxybenzoate-grown cells with benzoate-grown cells revealed several 3-hydroxybenzoate-induced proteins; the N-terminal amino acid sequences of four induced proteins were determined and the corresponding genes were identified and sequenced. A cluster of six adjacent genes contained the genes for substrate-induced proteins 1 to 3; this cluster may not yet be complete. Protein 1 is a short-chain alcohol dehydrogenase. Protein 2 is a member of enoyl-CoA hydratase enzymes. Protein 3 was identified as 3-hydroxybenzoate-CoA ligase. Protein 4 is another member of the enoyl-CoA hydratases. In addition, three genes coding for enzymes of beta-oxidation were present. The anaerobic 3-hydroxybenzoate metabolism here obviously combines an enzyme (benzoyl-CoA reductase) and electron carrier (ferredoxin) of the general benzoyl-CoA pathway with enzymes specific for the 3-hydroxybenzoate pathway. This raises some questions concerning the regulation of both pathways.

摘要

在反硝化细菌芳香陶厄氏菌(Thauera aromatica)中研究了3-羟基苯甲酸的厌氧代谢。以该底物生长的细胞适应于以苯甲酸生长,但不适应以4-羟基苯甲酸生长。反之,以4-羟基苯甲酸生长的细胞不利用3-羟基苯甲酸。3-羟基苯甲酸代谢的第一步是辅酶A(CoA)硫酯的形成,这由一种可诱导的3-羟基苯甲酸-CoA连接酶催化。该酶被纯化并进行了特性鉴定。细胞提取物对3-羟基苯甲酰-CoA的进一步代谢需要MgATP,并与每摩尔添加底物氧化2摩尔还原型紫精染料偶联。3-羟基苯甲酰-CoA还原酶的纯化表明,这种活性归因于苯甲酰-CoA还原酶,其还原3-羟基类似物的效率几乎与苯甲酰-CoA相同。含有羟基取代的脂环族二烯酰-CoA产物的进一步代谢显然需要额外的特异性酶。比较以3-羟基苯甲酸生长的细胞和以苯甲酸生长的细胞的蛋白质图谱,发现了几种3-羟基苯甲酸诱导的蛋白质;测定了四种诱导蛋白的N端氨基酸序列,并鉴定和测序了相应的基因。六个相邻基因的簇包含底物诱导蛋白1至3的基因;该簇可能尚未完整。蛋白1是一种短链醇脱氢酶。蛋白2是烯酰-CoA水合酶家族的成员。蛋白3被鉴定为3-羟基苯甲酸-CoA连接酶。蛋白4是烯酰-CoA水合酶的另一个成员。此外,还存在三个编码β-氧化酶的基因。这里的厌氧3-羟基苯甲酸代谢显然将一般苯甲酰-CoA途径的一种酶(苯甲酰-CoA还原酶)和电子载体(铁氧化还原蛋白)与3-羟基苯甲酸途径特有的酶结合在一起。这就引发了关于这两条途径调控的一些问题。

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