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未鉴定的人类基因编码序列的预测。十九。来自大脑的100个新的cDNA克隆的完整序列,这些克隆在体外编码大蛋白。

Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

作者信息

Nagase T, Kikuno R, Hattori A, Kondo Y, Okumura K, Ohara O

机构信息

Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.

出版信息

DNA Res. 2000 Dec 31;7(6):347-55. doi: 10.1093/dnares/7.6.347.

Abstract

As an extension of our human cDNA project for accumulating sequence information on the coding sequences of unidentified genes, we here present the entire sequences of 100 cDNA clones of unidentified genes, named KIAA1673-KIAA1772, from three sets of size-fractionated cDNA libraries derived from human adult whole brain, hippocampus, and fetal whole brain. The average sizes of the inserts and corresponding open reading frames of cDNA clones analyzed here were 4.9 kb and 2.7 kb (corresponding to 895 amino acid residues), respectively. By computer-assisted analysis of the deduced amino acid sequences, 44 predicted gene products were classified into five functional categories of proteins relating to cell signaling/communication, nucleic acid management, cell structure/motility, protein management, and metabolism. Furthermore, the expression profiles of the genes were also studied in 10 human tissues, 8 brain regions, spinal cord, fetal brain and fetal liver by reverse-transcription-coupled polymerase chain reaction, the products of which were quantified by enzyme-linked immunosorbent assay.

摘要

作为我们人类cDNA项目的延伸,目的是积累未鉴定基因编码序列的信息,我们在此展示了来自人类成体全脑、海马体和胎儿全脑的三组大小分级cDNA文库中100个未鉴定基因的cDNA克隆的完整序列,命名为KIAA1673 - KIAA1772。这里分析的cDNA克隆的插入片段和相应开放阅读框的平均大小分别为4.9 kb和2.7 kb(对应895个氨基酸残基)。通过对推导的氨基酸序列进行计算机辅助分析,44个预测的基因产物被分类为与细胞信号传导/通讯、核酸管理、细胞结构/运动、蛋白质管理和代谢相关的五类功能蛋白。此外,还通过逆转录偶联聚合酶链反应研究了这些基因在10种人类组织、8个脑区、脊髓、胎儿脑和胎儿肝脏中的表达谱,其产物通过酶联免疫吸附测定进行定量。

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