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菠菜(Spinacia oleracea)质体染色体:完整核苷酸序列及基因组织

The plastid chromosome of spinach (Spinacia oleracea): complete nucleotide sequence and gene organization.

作者信息

Schmitz-Linneweber C, Maier R M, Alcaraz J P, Cottet A, Herrmann R G, Mache R

机构信息

Botanisches Institut der Ludwig-Maximilians-Universität, München, Germany.

出版信息

Plant Mol Biol. 2001 Feb;45(3):307-15. doi: 10.1023/a:1006478403810.

DOI:10.1023/a:1006478403810
PMID:11292076
Abstract

The chloroplast chromosome of spinach (Spinacia oleracea) is a double-stranded circular DNA molecule of 150,725 nucleotide pairs. A comparison of this chromosome with those of the three other autotrophic dicotyledons for which complete DNA sequences of plastid chromosomes are available confirms a conserved overall structure. Three classes of open reading frames were distinguished: (1) genes of known function which include 108 unique loci, (2) three hypothetical chloroplast reading frames (ycfs) that are highly conserved interspecifically, and (3) species-specific or rapidly diverging 'open reading frames'. A detailed transcript study of one of the latter (ycf15) shows that these loci may be transcribed, but do not constitute protein-coding genes.

摘要

菠菜(Spinacia oleracea)的叶绿体染色体是一个由150,725个核苷酸对组成的双链环状DNA分子。将该染色体与另外三种质体染色体DNA序列已完整测定的自养双子叶植物的染色体进行比较,证实了整体结构的保守性。区分出了三类开放阅读框:(1)已知功能的基因,包括108个独特位点;(2)三个种间高度保守的假定叶绿体阅读框(ycfs);(3)物种特异性或快速分化的“开放阅读框”。对后者之一(ycf15)的详细转录本研究表明,这些位点可能被转录,但并不构成蛋白质编码基因。

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2
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EMBO J. 1986 Sep;5(9):2043-2049. doi: 10.1002/j.1460-2075.1986.tb04464.x.
3
Gene transfer to the nucleus and the evolution of chloroplasts.
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