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细菌周期性群体运动理论:在奇异变形杆菌中的应用

Theory of periodic swarming of bacteria: application to Proteus mirabilis.

作者信息

Czirók A, Matsushita M, Vicsek T

机构信息

Department of Biological Physics, Eötvös University, Budapest, Hungary.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Mar;63(3 Pt 1):031915. doi: 10.1103/PhysRevE.63.031915. Epub 2001 Feb 27.

Abstract

The periodic swarming of bacteria is one of the simplest examples for pattern formation produced by the self-organized collective behavior of a large number of organisms. In the spectacular colonies of Proteus mirabilis (the most common species exhibiting this type of growth), a series of concentric rings are developed as the bacteria multiply and swarm following a scenario that periodically repeats itself. We have developed a theoretical description for this process in order to obtain a deeper insight into some of the typical processes governing the phenomena in systems of many interacting living units. Our approach is based on simple assumptions directly related to the latest experimental observations on colony formation under various conditions. The corresponding one-dimensional model consists of two coupled differential equations investigated here both by numerical integrations and by analyzing the various expressions obtained from these equations using a few natural assumptions about the parameters of the model. We determine the phase diagram corresponding to systems exhibiting periodic swarming, and discuss in detail how the various stages of the colony development can be interpreted in our framework. We point out that all of our theoretical results are in excellent agreement with the complete set of available observations. Thus the present study represents one of the few examples where self-organized biological pattern formation is understood within a relatively simple theoretical approach, leading to results and predictions fully compatible with experiments.

摘要

细菌的周期性群体运动是大量生物体自组织集体行为产生模式形成的最简单例子之一。在奇异变形杆菌(表现出这种生长类型的最常见物种)壮观的菌落中,随着细菌繁殖和群体运动,会形成一系列同心环,且这一过程会周期性重复。我们为这一过程建立了理论描述,以便更深入地了解许多相互作用的生命单元系统中控制这些现象的一些典型过程。我们的方法基于与各种条件下菌落形成的最新实验观察直接相关的简单假设。相应的一维模型由两个耦合的微分方程组成,我们通过数值积分以及利用关于模型参数的一些自然假设分析从这些方程得到的各种表达式来研究这两个方程。我们确定了与呈现周期性群体运动的系统相对应的相图,并详细讨论了在我们的框架内如何解释菌落发育的各个阶段。我们指出,我们所有的理论结果与全部现有观察结果都非常吻合。因此,本研究是少数几个通过相对简单的理论方法理解自组织生物模式形成的例子之一,所得结果和预测与实验完全兼容。

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