Kim J H, Odutola J A, Popham J, Jones L, von Laven S
Department of Chemistry, Alabama A&M University, Normal 35762, USA.
J Inorg Biochem. 2001 Mar;84(1-2):145-50. doi: 10.1016/s0162-0134(00)00209-9.
The stability of the tautomers of each of the three important substrates of xanthine oxidase, xanthine, 2-oxo-6-methylpurine, and lumazine, was examined by quantum mechanical calculations. The geometries of these tautomers were optimized at the AM1, Hartree-Fock (HF/6-31G), and hybrid Hartree-Fock/density functional theory (B3LYP/6-31G(d)) levels of theory. The single point energies of some of the more stable tautomers for each of the substrates were calculated at the B3LYP/6-311 +G(2d,p) level of theory. The Conductor Polarized Continuum Model (CPCM) was used to evaluate the solvent effects on the relative stabilities of these tautomers. The calculations clearly identify the lowest energy tautomeric form for xanthine and lumazine. On the other hand, there appear to be three tautomers for 2-oxo-6-methylpurine, with only minor energetic differences in vacuo. In water, however, only one of them predominates. The lowest energy tautomers presumably represent the predominant tautomeric forms at the molybdenum center of xanthine oxidase during catalysis. Implications of these computational results are discussed in the context of enzyme catalysis.
通过量子力学计算研究了黄嘌呤氧化酶的三种重要底物(黄嘌呤、2-氧代-6-甲基嘌呤和鲁米诺嗪)各自互变异构体的稳定性。这些互变异构体的几何结构在AM1、哈特里-福克(HF/6-31G)以及混合哈特里-福克/密度泛函理论(B3LYP/6-31G(d))理论水平上进行了优化。在B3LYP/6-311 +G(2d,p)理论水平上计算了每种底物中一些较稳定互变异构体的单点能量。采用导体极化连续介质模型(CPCM)评估溶剂对这些互变异构体相对稳定性的影响。计算结果明确确定了黄嘌呤和鲁米诺嗪的最低能量互变异构形式。另一方面,2-氧代-6-甲基嘌呤似乎有三种互变异构体,在真空中能量差异很小。然而,在水中只有其中一种占主导。最低能量互变异构体可能代表催化过程中黄嘌呤氧化酶钼中心的主要互变异构形式。在酶催化的背景下讨论了这些计算结果的意义。