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沉默染色质有利于激活因子结合和预起始复合物的募集。

Silenced chromatin is permissive to activator binding and PIC recruitment.

作者信息

Sekinger E A, Gross D S

机构信息

Department of Biochemistry and Molecular Biology, Louisiana State University Health Sciences Center, Shreveport, LA 71130, USA.

出版信息

Cell. 2001 May 4;105(3):403-14. doi: 10.1016/s0092-8674(01)00329-4.

DOI:10.1016/s0092-8674(01)00329-4
PMID:11348596
Abstract

Chromatin is thought to repress transcription by limiting access of the DNA to transcription factors. Using a yeast heat shock gene flanked by mating-type silencers as a model system, we find that repressive, SIR-generated heterochromatin is permissive to the constitutive binding of an activator, HSF, and two components of the preinitiation complex (PIC), TBP and Pol II. These factors cohabitate the promoter with Sir silencing proteins and deacetylated nucleosomal histones. The heterochromatic HMRa1 promoter is also occupied by TBP and Pol II, suggesting that SIR regulates gene expression not by restricting factor access to DNA but rather by blocking a step downstream of PIC recruitment. Interestingly, activation of silent promoter chromatin occurs in the absence of histone displacement and without change in histone acetylation state.

摘要

染色质被认为通过限制DNA与转录因子的接触来抑制转录。我们使用一个两侧带有交配型沉默子的酵母热休克基因作为模型系统,发现由SIR产生的抑制性异染色质允许激活因子HSF以及起始前复合物(PIC)的两个组分TBP和Pol II的组成型结合。这些因子与Sir沉默蛋白和去乙酰化核小体组蛋白共同占据启动子。异染色质的HMRa1启动子也被TBP和Pol II占据,这表明SIR调节基因表达不是通过限制因子与DNA的接触,而是通过阻断PIC募集下游的一个步骤。有趣的是,沉默启动子染色质的激活在没有组蛋白置换且组蛋白乙酰化状态没有改变的情况下发生。

相似文献

1
Silenced chromatin is permissive to activator binding and PIC recruitment.沉默染色质有利于激活因子结合和预起始复合物的募集。
Cell. 2001 May 4;105(3):403-14. doi: 10.1016/s0092-8674(01)00329-4.
2
Sir2 silences gene transcription by targeting the transition between RNA polymerase II initiation and elongation.Sir2通过靶向RNA聚合酶II起始与延伸之间的转变来沉默基因转录。
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SIR repression of a yeast heat shock gene: UAS and TATA footprints persist within heterochromatin.酵母热休克基因的SIR抑制:异染色质内UAS和TATA足迹持续存在。
EMBO J. 1999 Dec 15;18(24):7041-55. doi: 10.1093/emboj/18.24.7041.
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Perinuclear localization of chromatin facilitates transcriptional silencing.染色质的核周定位有助于转录沉默。
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Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation.酵母中沉默染色质组装的步骤:Sir2/Sir4复合物不依赖Sir3与沉默子的结合以及Sir2依赖性去乙酰化的作用
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Modulation of life-span by histone deacetylase genes in Saccharomyces cerevisiae.酿酒酵母中组蛋白去乙酰化酶基因对寿命的调控
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The Sir proteins of Saccharomyces cerevisiae: mediators of transcriptional silencing and much more.酿酒酵母的Sir蛋白:转录沉默的介导因子及其他多种功能。
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Recruitment of TBP or TFIIB to a promoter proximal position leads to stimulation of RNA polymerase II transcription without activator proteins both in vivo and in vitro.在体内和体外,TBP 或 TFIIB 募集到启动子近端位置都会在没有激活蛋白的情况下刺激 RNA 聚合酶 II 的转录。
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The molecular biology of the SIR proteins.SIR蛋白的分子生物学
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Heat Shock Factor 1 forms nuclear condensates and restructures the yeast genome before activating target genes.热休克因子 1 在激活靶基因之前形成核凝聚体并重构酵母基因组。
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Transcriptional silencing in Saccharomyces cerevisiae: known unknowns.酿酒酵母中的转录沉默:已知的未知。
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Yeast heterochromatin stably silences only weak regulatory elements by altering burst duration.酵母异染色质通过改变爆发持续时间来稳定地沉默仅弱的调控元件。
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Yeast Heterochromatin Only Stably Silences Weak Regulatory Elements by Altering Burst Duration.酵母异染色质仅通过改变爆发持续时间来稳定沉默弱调控元件。
bioRxiv. 2023 Oct 5:2023.10.05.561072. doi: 10.1101/2023.10.05.561072.
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