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13C(α)和13C(β)化学位移作为描绘肽中β-发夹结构的工具。

13C(alpha) and 13C(beta) chemical shifts as a tool to delineate beta-hairpin structures in peptides.

作者信息

Santiveri C M, Rico M, Jiménez M A

机构信息

Instituto de Estructura de la Materia, Consejo Superior de Investigaciones Científicas, Madrid, Spain.

出版信息

J Biomol NMR. 2001 Apr;19(4):331-45. doi: 10.1023/a:1011224625129.

Abstract

Unravelling the factors that contribute to the formation and the stability of beta-sheet structure in peptides is a subject of great current interest. A beta-hairpin, the smallest beta-sheet motif, consists of two antiparallel hydrogen-bonded beta-strands linked by a loop region. We have performed a statistical analysis on protein beta-hairpins showing that the most abundant types of beta-hairpins, 2:2, 3:5 and 4:4, have characteristic patterns of 13C(alpha) and 13C(beta) conformational shifts, as expected on the basis of their phi and psi angles. This fact strongly supports the potential value of 13C(alpha) and 13C(beta) conformational shifts as a means to identify beta-hairpin motifs in peptides. Their usefulness was confirmed by analysing the patterns of 13C(alpha) and 13C(beta) conformational shifts in 13 short peptides, 10-15 residues long, that adopt beta-hairpin structures in aqueous solution. Furthermore, we have investigated their potential as a method to quantify beta-hairpin populations in peptides.

摘要

阐明有助于肽中β-折叠结构形成和稳定性的因素是当前备受关注的课题。β-发夹是最小的β-折叠基序,由两个通过环区域连接的反平行氢键连接的β-链组成。我们对蛋白质β-发夹进行了统计分析,结果表明,最常见的β-发夹类型,即2:2、3:5和4:4,具有特征性的13C(α)和13C(β)构象位移模式,这与基于它们的φ和ψ角所预期的一致。这一事实有力地支持了13C(α)和13C(β)构象位移作为识别肽中β-发夹基序手段的潜在价值。通过分析13个10至15个残基长的短肽在水溶液中采用β-发夹结构时的13C(α)和13C(β)构象位移模式,证实了它们的实用性。此外,我们还研究了它们作为定量肽中β-发夹群体的方法的潜力。

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