Mikulecky D C
Medical School, Virginia Commonwealth University, Richmond 23298-0551, USA.
Comput Chem. 2001 Jul;25(4):369-91. doi: 10.1016/s0097-8485(01)00072-9.
Most systems of interest in today's world are highly structured and highly interactive. They cannot be reduced to simple components without losing a great deal of their system identity. Network thermodynamics is a marriage of classical and non-equilibrium thermodynamics along with network theory and kinetics to provide a practical framework for handling these systems. The ultimate result of any network thermodynamic model is still a set of state vector equations. But these equations are built in a new informative way so that information about the organization of the system is identifiable in the structure of the equations. The domain of network thermodynamics is all of physical systems theory. By using the powerful circuit simulator, the Simulation Program with Integrated Circuit Emphasis (SPICE), as a general systems simulator, any highly non-linear stiff system can be simulated. Furthermore, the theoretical findings of network thermodynamics are important new contributions. The contribution of a metric structure to thermodynamics compliments and goes beyond other recent work in this area. The application of topological reasoning through Tellegen's theorem shows that a mathematical structure exists into which all physical systems can be represented canonically. The old results in non-equilibrium thermodynamics due to Onsager can be reinterpreted and extended using these new, more holistic concepts about systems. Some examples are given. These are but a few of the many applications of network thermodynamics that have been proven to extend our capacity for handling the highly interactive, non-linear systems that populate both biology and chemistry. The presentation is carried out in the context of the recent growth of the field of complexity science. In particular, the context used for this discussion derives from the work of the mathematical biologist, Robert Rosen.
当今世界大多数受关注的系统都是高度结构化且高度交互的。如果不大量丧失其系统特性,它们就无法简化为简单的组件。网络热力学是经典热力学和非平衡热力学与网络理论及动力学的结合,旨在为处理这些系统提供一个实用的框架。任何网络热力学模型的最终结果仍然是一组状态向量方程。但这些方程是以一种全新的、有信息量的方式构建的,这样关于系统组织的信息在方程结构中是可识别的。网络热力学的领域涵盖了所有物理系统理论。通过使用强大的电路模拟器,即强调集成电路的模拟程序(SPICE)作为通用系统模拟器,可以模拟任何高度非线性的刚性系统。此外,网络热力学的理论成果是重要的新贡献。度量结构对热力学的贡献补充并超越了该领域近期的其他工作。通过特勒根定理应用拓扑推理表明,存在一种数学结构,所有物理系统都可以在其中以规范的方式表示。昂萨格在非平衡热力学方面的旧成果可以用这些关于系统的更新颖、更全面的概念进行重新解释和扩展。给出了一些例子。这些只是网络热力学众多应用中的一部分,已被证明能够扩展我们处理生物学和化学中普遍存在的高度交互、非线性系统的能力。本文是在复杂性科学领域近期发展的背景下进行阐述的。特别是,本次讨论所使用的背景源自数学生物学家罗伯特·罗森的工作。