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秘鲁马铃薯金线虫分类地位的分子研究方法以及球孢囊线虫本地种群与引进种群的基因库相似性

Molecular approaches to the taxonomic position of Peruvian potato cyst nematodes and gene pool similarities in indigenous and imported populations of Globodera.

作者信息

Grenier E, Bossis M, Fouville D, Renault L, Mugniéry D

机构信息

UMR INRA/ENSAR Biologie des Organismes et des Populations appliquée à la Protection des Plantes, Domaine de la Motte, BP 35327, 35653 Le Rheu cedex France.

出版信息

Heredity (Edinb). 2001 Mar;86(Pt 3):277-90. doi: 10.1046/j.1365-2540.2001.00826.x.

Abstract

Peruvian potato cyst nematode populations were analysed to assess both their inter- and intraspecific similarities. ITS--RFLP and two satellite DNA sequences were used as taxonomic tools. Both techniques have confirmed that the Peruvian populations have as their closest relatives the European Globodera pallida, despite the detection of clear differences that prevents us from assigning these South American populations unambiguously to any Globodera species. A more precise study of the variability of these Peruvian populations was investigated and they were compared with the imported European populations using protein (2-DGE) and DNA (RAPD) datasets. The clear distinction between the Peruvian and the European populations was confirmed and, inside each group, no correlation was found between the pathotype classification and the observed clustering of the populations. Surprisingly, while RAPDs revealed a higher variability in the Peruvian group than in the European one, some characteristic proteins were found by 2-DGE in some European populations, whereas it was impossible to find any in the Peruvian populations. It is concluded that the primary founders of the European populations may have an origin other than that of the Peruvian populations involved in this study.

摘要

对秘鲁马铃薯胞囊线虫种群进行了分析,以评估其种间和种内的相似性。内部转录间隔区限制性片段长度多态性(ITS-RFLP)和两个卫星DNA序列被用作分类工具。这两种技术均证实,秘鲁种群与欧洲的苍白球孢囊线虫亲缘关系最近,尽管检测到明显差异,使得我们无法将这些南美种群明确归为任何球孢囊线虫物种。对这些秘鲁种群的变异性进行了更精确的研究,并使用蛋白质(二维凝胶电泳,2-DGE)和DNA(随机扩增多态性DNA,RAPD)数据集将它们与引进的欧洲种群进行了比较。秘鲁种群和欧洲种群之间的明显区别得到了证实,并且在每组内部,致病型分类与观察到的种群聚类之间没有发现相关性。令人惊讶的是,虽然RAPD显示秘鲁种群组的变异性高于欧洲种群组,但二维凝胶电泳在一些欧洲种群中发现了一些特征性蛋白质,而在秘鲁种群中却无法找到任何特征性蛋白质。得出的结论是,欧洲种群的最初奠基者可能起源于本研究中涉及的秘鲁种群之外的其他地方。

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