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疏渗透压效应:蛋白质折叠中一种热力学力的自然选择

The osmophobic effect: natural selection of a thermodynamic force in protein folding.

作者信息

Bolen D W, Baskakov I V

机构信息

Department of Human Biological Chemistry and Genetics, Sealy Center for Structural Biology, University of Texas Medical Branch, Galveston 77555-1052, USA.

出版信息

J Mol Biol. 2001 Jul 27;310(5):955-63. doi: 10.1006/jmbi.2001.4819.

Abstract

Intracellular organic osmolytes are present in certain organisms adapted to harsh environments and these osmolytes protect intracellular macromolecules against the denaturing environmental stress. In natural selection of organic osmolytes as protein stabilizers, it appears that the osmolyte property selected for is the unfavorable interaction between the osmolyte and the peptide backbone, a solvophobic thermodynamic force that we call the osmophobic effect. Because the peptide backbone is highly exposed to osmolyte in the denatured state, the osmophobic effect preferentially raises the free energy of the denatured state, shifting the equilibrium in favor of the native state. By focusing the solvophobic force on the denatured state, the native state is left free to function relatively unfettered by the presence of osmolyte. The osmophobic effect is a newly uncovered thermodynamic force in nature that complements the well-recognized hydrophobic interactions, hydrogen bonding, electrostatic and dispersion forces that drive protein folding. In organisms whose survival depends on the intracellular presence of osmolytes that can counteract denaturing stresses, the osmophobic effect is as fundamental to protein folding as these well-recognized forces.

摘要

细胞内有机渗透溶质存在于某些适应恶劣环境的生物体中,这些渗透溶质可保护细胞内大分子免受变性环境压力的影响。在有机渗透溶质作为蛋白质稳定剂的自然选择过程中,所选择的渗透溶质特性似乎是渗透溶质与肽主链之间的不利相互作用,这是一种疏溶剂热力学力,我们称之为疏渗透效应。由于肽主链在变性状态下高度暴露于渗透溶质,疏渗透效应优先提高变性状态的自由能,使平衡向天然状态移动。通过将疏溶剂力集中在变性状态上,天然状态在渗透溶质存在的情况下能够相对自由地发挥功能。疏渗透效应是自然界中一种新发现的热力学力,它补充了驱动蛋白质折叠的公认的疏水相互作用、氢键、静电和色散力。在那些生存依赖于细胞内存在能够抵消变性压力的渗透溶质的生物体中,疏渗透效应对于蛋白质折叠而言与这些公认的力同样重要。

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