An P, Rosmond R, Borecki I B, Ukkola O, Rice T, Gagnon J, Rankinen T, Leon A S, Skinner J S, Wilmore J H, Bouchard C, Rao D C
Division of Biostatistics, Washington University School of Medicine, St Louis, MO 63110, USA.
Metabolism. 2001 Nov;50(11):1315-22. doi: 10.1053/meta.2001.27229.
A genome-wide linkage scan was performed to identify genomic regions that influence levels of dehydroepiandrosterone (DHEA), DHEA sulfate (DHEAS), and DHEA fatty acid esters (DHEA-FA) at baseline and in response to 20 weeks of endurance exercise training in sedentary white and black participants in the HERITAGE Family Study. The baseline levels were log-transformed and adjusted for the effects of age and sex prior to genetic analysis. The training responses were adjusted for the effects of age, sex, and the baseline values. A total of 509 autosomal component polymorphic markers were used for the genome scan with an average spacing of 6.0 Mb. Multipoint variance components linkage analyses were performed in nuclear families containing 360 white and 106 black sibling pairs. We found 5 genomic regions with significant linkages for baseline DHEA-FA in whites, with log odd (LOD) scores over 3.6 (P < 2 x 10(-5)). They include (1) D1S468 (LOD 4.56, 2.533 Mb, 1p36.22); (2) D2S177 (LOD 5.65, 52.663 Mb, 2p16.3); (3) D4S2397 (LOD 3.98, 32.246 Mb, 4p15.2); (4) the paraoxonase loci (LOD 3.93 approximately 3.99, 101.544 approximately 102.933 Mb, 7q21.3), and D7S821 (LOD 3.88, 104.497 Mb, 7q22.1); and (5) D12S372 (LOD 4.66, 2.129 Mb, 12q13.33). In addition, we obtained evidence of suggestive linkages (2.2 < LOD < 3.6; 2 x 10(-5) < P < 7 x 10(-4)) on chromosomes 3p, 6q, and 8q for baseline DHEAS; on chromosomes 2q, 3p, 9q, 10p, 16q, and 17p for baseline DHEA-FA in whites; and on chromosomes 9q and 11p for baseline DHEA in blacks. This is the first genome-wide linkage scan searching for genomic regions influencing human DHEA levels. Several potential candidate genes are located in these genomic regions, which warrant further studies in HERITAGE and other cohorts.
在遗产家庭研究中,对久坐不动的白人和黑人参与者进行了全基因组连锁扫描,以确定在基线时以及在进行20周耐力运动训练后的脱氢表雄酮(DHEA)、硫酸脱氢表雄酮(DHEAS)和脱氢表雄酮脂肪酸酯(DHEA-FA)水平的影响基因组区域。在进行遗传分析之前,对基线水平进行对数转换,并对年龄和性别的影响进行调整。对训练反应进行了年龄、性别和基线值影响的调整。总共使用了509个常染色体成分多态性标记进行基因组扫描,平均间距为6.0 Mb。在包含360对白人兄弟姐妹和106对黑人兄弟姐妹的核心家庭中进行了多点方差成分连锁分析。我们发现白人中有5个基因组区域与基线DHEA-FA存在显著连锁,对数优势(LOD)得分超过3.6(P < 2 x 10(-5))。它们包括:(1)D1S468(LOD 4.56,2.533 Mb,1p36.22);(2)D2S177(LOD 5.65,52.663 Mb,2p16.3);(3)D4S2397(LOD 3.98,32.246 Mb,4p15.2);(4)对氧磷酶基因座(LOD 3.93约3.99,101.544约102.933 Mb,7q21.3)和D7S821(LOD 3.88,104.497 Mb,7q22.1);以及(5)D12S372(LOD 4.66,2.129 Mb,12q13.33)。此外,我们获得了在3号染色体p臂、6号染色体q臂和8号染色体q臂上基线DHEAS存在提示性连锁的证据(2.2 < LOD < 3.6;2 x 10(-5) < P < 7 x 10(-4));在2号染色体q臂、3号染色体p臂、9号染色体q臂、1号染色体p臂、16号染色体q臂和17号染色体p臂上白人基线DHEA-FA存在提示性连锁的证据;以及在9号染色体q臂和11号染色体p臂上黑人基线DHEA存在提示性连锁的证据。这是首次进行全基因组连锁扫描以寻找影响人类DHEA水平的基因组区域。这些基因组区域中定位了几个潜在的候选基因,这值得在遗产家庭研究和其他队列中进行进一步研究。