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在遗产家庭研究中对次最大运动心率进行全基因组连锁扫描。

Genome-wide linkage scan for submaximal exercise heart rate in the HERITAGE family study.

作者信息

Spielmann Nadine, Leon Arthur S, Rao D C, Rice Treva, Skinner James S, Rankinen Tuomo, Bouchard Claude

机构信息

Pennington Biomedical Research Center, 6400 Perkins Road, Baton Rouge, LA 70808-4124, USA.

出版信息

Am J Physiol Heart Circ Physiol. 2007 Dec;293(6):H3366-71. doi: 10.1152/ajpheart.00042.2007. Epub 2007 Oct 5.

Abstract

The purpose of this study was to identify regions of the human genome linked to submaximal exercise heart rates in the sedentary state and in response to a standardized 20-wk endurance training program in blacks and whites of the HERITAGE Family Study. A total of 701 polymorphic markers covering the 22 autosomes were used in the genome-wide linkage scan, with 328 sibling pairs from 99 white nuclear families and 102 pairs from 115 black family units. Steady-state heart rates were measured at the relative intensity of 60% maximal oxygen uptake (HR60) and at the absolute intensity of 50 W (HR50). Baseline phenotypes were adjusted for age, sex, and baseline body mass index (BMI) and training responses (posttraining minus baseline, Delta) were adjusted for age, sex, baseline BMI, and baseline value of the phenotype. Two analytic strategies were used, a multipoint variance components and a regression-based multipoint linkage analysis. In whites, promising linkages (LOD > 1.75) were identified on 18q21-q22 for baseline HR50 (LOD = 2.64; P = 0.0002) and DeltaHR60 (LOD = 2.10; P = 0.0009) and on chromosome 2q33.3 for DeltaHR50 (LOD = 2.13; P = 0.0009). In blacks, evidence of promising linkage for baseline HR50 was detected with several markers within the chromosomal region 10q24-q25.3 (peak LOD = 2.43, P = 0.0004 with D10S597). The most promising regions for fine mapping in the HERITAGE Family Study were found on 2q33 for HR50 training response in whites, on 10q25-26 for baseline HR60 in blacks, and on 18q21-22 for both baseline HR50 and DeltaHR60 in whites.

摘要

本研究的目的是在HERITAGE家族研究的黑人和白人中,确定人类基因组中与久坐状态下的次最大运动心率以及对标准化的20周耐力训练计划的反应相关的区域。在全基因组连锁扫描中,共使用了覆盖22条常染色体的701个多态性标记,其中包括来自99个白人核心家庭的328对同胞对和来自115个黑人家庭单位的102对同胞对。在最大摄氧量相对强度为60%(HR60)和绝对强度为50瓦(HR50)时测量稳态心率。对基线表型进行年龄、性别和基线体重指数(BMI)校正,对训练反应(训练后减去基线,Delta)进行年龄、性别、基线BMI和表型基线值校正。使用了两种分析策略,即多点方差成分分析和基于回归的多点连锁分析。在白人中,在18q21-q22区域发现了与基线HR50(LOD = 2.64;P = 0.0002)和DeltaHR60(LOD = 2.10;P = 0.0009)相关的有前景的连锁,在2q33.3染色体上发现了与DeltaHR50相关的有前景的连锁(LOD = 2.13;P = 0.0009)。在黑人中,在染色体区域10q24-q25.3内的几个标记检测到了与基线HR50相关的有前景的连锁证据(使用D10S597时峰值LOD = 2.43,P = 0.0004)。在HERITAGE家族研究中,最有前景的精细定位区域为:白人中HR50训练反应在2q33,黑人中基线HR60在10q25-26,白人中基线HR50和DeltaHR60均在18q21-22。

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