相似文献
1
Preferred proline puckerings in cis and trans peptide groups: implications for collagen stability.
Protein Sci. 2001 Dec;10(12):2627-32. doi: 10.1110/ps.ps.26601a.
2
Cell adhesion promoting peptide GVKGDKGNPGWPGAP from the collagen type IV triple helix: cis/trans proline-induced multiple 1H NMR conformations and evidence for a KG/PG multiple turn repeat motif in the all-trans proline state.
Biochemistry. 1991 Aug 20;30(33):8251-67. doi: 10.1021/bi00247a022.
3
Understanding the role of stereoelectronic effects in determining collagen stability. 1. A quantum mechanical study of proline, hydroxyproline, and fluoroproline dipeptide analogues in aqueous solution.
J Am Chem Soc. 2001 Dec 19;123(50):12568-77. doi: 10.1021/ja010599i.
4
Conformational preferences of proline oligopeptides.
J Phys Chem B. 2006 Sep 7;110(35):17645-55. doi: 10.1021/jp0629792.
5
Impact of cis-proline analogs on peptide conformation.
Biopolymers. 2006 Apr 5;81(5):392-406. doi: 10.1002/bip.20431.
6
Quantum mechanical study of the conformational behavior of proline and 4R-hydroxyproline dipeptide analogues in vacuum and in aqueous solution.
J Comput Chem. 2002 Feb;23(3):341-50. doi: 10.1002/jcc.10015.
7
Hydroxyproline Ring Pucker Causes Frustration of Helix Parameters in the Collagen Triple Helix.
Sci Rep. 2015 Jul 29;5:12556. doi: 10.1038/srep12556.
8
Substituted 2-azabicyclo[2.1.1]hexanes as constrained proline analogues: implications for collagen stability.
J Org Chem. 2004 Dec 10;69(25):8565-73. doi: 10.1021/jo049242y.
9
Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.
J Am Chem Soc. 2002 Mar 20;124(11):2497-505. doi: 10.1021/ja0166904.
10
Prolyl 4-Hydroxylase: Substrate Isosteres in Which an (E)- or (Z)-Alkene Replaces the Prolyl Peptide Bond.
Biochemistry. 2017 Jan 10;56(1):219-227. doi: 10.1021/acs.biochem.6b00976. Epub 2016 Dec 21.
引用本文的文献
1
Decoding elegant interplay among different stereo-electronic effects due to the ancient prolyl-4-hydroxylation stabilizing collagenous helicity.
iScience. 2025 Apr 10;28(5):112393. doi: 10.1016/j.isci.2025.112393. eCollection 2025 May 16.
2
Mixing and Matching of Hybrid Megasynthases is a Hub for the Evolution of Metabolic Diversity in Cyanobacteria.
Angew Chem Int Ed Engl. 2025 Jun 24;64(26):e202502461. doi: 10.1002/anie.202502461. Epub 2025 May 19.
3
Stabilization of a miniprotein fold by an unpuckered proline surrogate.
Commun Chem. 2025 Mar 12;8(1):76. doi: 10.1038/s42004-025-01474-6.
4
Conformationally constrained cyclic grafted peptidomimetics targeting protein-protein interactions.
Pept Sci (Hoboken). 2023 Sep;115(5). doi: 10.1002/pep2.24328. Epub 2023 Jul 20.
5
First series of -alkylamino peptoid homooligomers: solution phase synthesis and conformational investigation.
Beilstein J Org Chem. 2022 Jul 14;18:845-854. doi: 10.3762/bjoc.18.85. eCollection 2022.
6
In-depth correlation analysis demonstrates that 4-hydroxyproline at the Yaa position of Gly-Xaa-Yaa repeats dominantly stabilizes collagen triple helix.
Matrix Biol Plus. 2021 May 7;10:100067. doi: 10.1016/j.mbplus.2021.100067. eCollection 2021 Jun.
7
A Proline-Based Tectons and Supramolecular Synthons for Drug Design 2.0: A Case Study of ACEI.
Pharmaceuticals (Basel). 2020 Oct 24;13(11):338. doi: 10.3390/ph13110338.
8
The Distinct Conformational Landscapes of 4S-Substituted Prolines That Promote an endo Ring Pucker.
Chemistry. 2019 Aug 27;25(48):11356-11364. doi: 10.1002/chem.201902382. Epub 2019 Aug 5.
9
Super Secondary Structure Consisting of a Polyproline II Helix and a β-Turn in Leucine Rich Repeats in Bacterial Type III Secretion System Effectors.
Protein J. 2018 Jun;37(3):223-236. doi: 10.1007/s10930-018-9767-9.
10
A structural overview of mycobacterial adhesins: Key biomarkers for diagnostics and therapeutics.
Protein Sci. 2018 Feb;27(2):369-380. doi: 10.1002/pro.3346. Epub 2017 Dec 27.
本文引用的文献
1
Inductive Effects on the Energetics of Prolyl Peptide Bond Isomerization: Implications for Collagen Folding and Stability.
J Am Chem Soc. 1996;118(49):12261-12266. doi: 10.1021/ja9623119.
2
Crystal structure of a collagen-like polypeptide with repeating sequence Pro-Hyp-Gly at 1.4 A resolution: implications for collagen hydration.
Biopolymers. 2000;56(1):8-13. doi: 10.1002/1097-0282(2000)56:1<8::AID-BIP1037>3.0.CO;2-W.
3
Conformational stability of collagen relies on a stereoelectronic effect.
J Am Chem Soc. 2001 Jan 31;123(4):777-8. doi: 10.1021/ja005542v.
4
Structural bases of collagen stabilization induced by proline hydroxylation.
Biopolymers. 2001 Apr 15;58(5):459-64. doi: 10.1002/1097-0282(20010415)58:5<459::AID-BIP1021>3.0.CO;2-V.
5
A domain-swapped RNase A dimer with implications for amyloid formation.
Nat Struct Biol. 2001 Mar;8(3):211-4. doi: 10.1038/84941.
6
The Protein Data Bank and the challenge of structural genomics.
Nat Struct Biol. 2000 Nov;7 Suppl:957-9. doi: 10.1038/80734.
7
Glycosylation/Hydroxylation-induced stabilization of the collagen triple helix. 4-trans-hydroxyproline in the Xaa position can stabilize the triple helix.
J Biol Chem. 2000 Aug 11;275(32):24466-9. doi: 10.1074/jbc.M003336200.
8
New analysis of the phylogenetic change of collagen thermostability.
Biopolymers. 2000 May;53(6):523-8. doi: 10.1002/(SICI)1097-0282(200005)53:6<523::AID-BIP8>3.0.CO;2-7.
9
Synthesis and folding of native collagen III model peptides.
Biochemistry. 1999 Oct 12;38(41):13610-22. doi: 10.1021/bi9905157.
10
Sequence dependent conformational variations of collagen triple-helical structure.
Nat Struct Biol. 1999 May;6(5):454-7. doi: 10.1038/8259.
Zotero 插件