Ceci Pierpaolo, Giangiacomo Laura, Boffi Alberto, Chiancone Emilia
Consiglio Nazionale delle Ricerche Center of Molecular Biology, Department of Biochemical Sciences, University La Sapienza, 00185 Rome, Italy.
J Biol Chem. 2002 Mar 1;277(9):6929-33. doi: 10.1074/jbc.M107422200. Epub 2001 Dec 12.
The subunit interface of the homodimeric hemoglobin from Scapharca inaequivalvis, HbI, is stabilized by a network of interactions that involve several hydrogen-bonded structural water molecules, a hydrophobic patch, and a single, symmetrical salt bridge between residues Lys-30 and Asp-89. Upon mutation of Lys-30 to Asp, the interface is destabilized markedly. Sedimentation equilibrium and velocity experiments allowed the estimate of the dimerization constants for the unliganded (K(1,2D) = 8 x 10(4) M(-1)) and for the CO-bound (K(1,2L) = 1 x 10(3) m(-1)) and oxygenated (K(1,2L) = 70 m(-1)) derivatives. For the oxygenated derivative, the destabilization of the subunit interface with respect to native HbI corresponds to about 8 kcal/mol, an unexpectedly high figure. In the K30D mutant, at variance with the native protein, oxygen affinity and cooperativity are strongly dependent on protein concentration. At low protein concentrations (e.g. 1.2 x 10(-5) m heme), at which the monomeric species becomes significant also in the unliganded derivative, oxygen affinity increases and cooperativity decreases. At protein concentrations where both derivatives are dimeric (e.g. 3.3 x 10(-3) m heme), both cooperativity and oxygen affinity decrease. Taken together, the experimental data indicate that in the K30D mutant, the mechanism of cooperativity is drastically altered and is driven by a ligand-linked monomer-dimer equilibrium rather than being based on a direct heme-heme communication as in native HbI.
不等齿毛蚶(Scapharca inaequivalvis)的同源二聚体血红蛋白HbI的亚基界面,通过一系列相互作用得以稳定,这些相互作用涉及多个氢键连接的结构水分子、一个疏水区域,以及残基Lys-30和Asp-89之间单一的对称盐桥。将Lys-30突变为Asp后,界面明显不稳定。沉降平衡和速度实验使得能够估算未结合配体时(K(1,2D) = 8×10⁴ M⁻¹)、结合CO时(K(1,2L) = 1×10³ M⁻¹)以及结合氧时(K(1,2L) = 70 M⁻¹)衍生物的二聚化常数。对于结合氧的衍生物,亚基界面相对于天然HbI的不稳定相当于约8千卡/摩尔,这一数值出乎意料地高。在K30D突变体中,与天然蛋白质不同,氧亲和力和协同性强烈依赖于蛋白质浓度。在低蛋白质浓度下(例如血红素浓度为1.2×10⁻⁵ M),此时单体形式在未结合配体的衍生物中也变得显著,氧亲和力增加而协同性降低。在两种衍生物均为二聚体的蛋白质浓度下(例如血红素浓度为3.3×10⁻³ M),协同性和氧亲和力均降低。综合来看,实验数据表明,在K30D突变体中,协同机制发生了剧烈改变,由配体连接的单体 - 二聚体平衡驱动,而非像天然HbI那样基于直接的血红素 - 血红素通讯。