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K30D突变破坏了不等同毛蚶同源二聚体血红蛋白亚基界面处唯一的盐桥,并改变了协同作用机制。

The mutation K30D disrupts the only salt bridge at the subunit interface of the homodimeric hemoglobin from Scapharca inaequivalvis and changes the mechanism of cooperativity.

作者信息

Ceci Pierpaolo, Giangiacomo Laura, Boffi Alberto, Chiancone Emilia

机构信息

Consiglio Nazionale delle Ricerche Center of Molecular Biology, Department of Biochemical Sciences, University La Sapienza, 00185 Rome, Italy.

出版信息

J Biol Chem. 2002 Mar 1;277(9):6929-33. doi: 10.1074/jbc.M107422200. Epub 2001 Dec 12.

Abstract

The subunit interface of the homodimeric hemoglobin from Scapharca inaequivalvis, HbI, is stabilized by a network of interactions that involve several hydrogen-bonded structural water molecules, a hydrophobic patch, and a single, symmetrical salt bridge between residues Lys-30 and Asp-89. Upon mutation of Lys-30 to Asp, the interface is destabilized markedly. Sedimentation equilibrium and velocity experiments allowed the estimate of the dimerization constants for the unliganded (K(1,2D) = 8 x 10(4) M(-1)) and for the CO-bound (K(1,2L) = 1 x 10(3) m(-1)) and oxygenated (K(1,2L) = 70 m(-1)) derivatives. For the oxygenated derivative, the destabilization of the subunit interface with respect to native HbI corresponds to about 8 kcal/mol, an unexpectedly high figure. In the K30D mutant, at variance with the native protein, oxygen affinity and cooperativity are strongly dependent on protein concentration. At low protein concentrations (e.g. 1.2 x 10(-5) m heme), at which the monomeric species becomes significant also in the unliganded derivative, oxygen affinity increases and cooperativity decreases. At protein concentrations where both derivatives are dimeric (e.g. 3.3 x 10(-3) m heme), both cooperativity and oxygen affinity decrease. Taken together, the experimental data indicate that in the K30D mutant, the mechanism of cooperativity is drastically altered and is driven by a ligand-linked monomer-dimer equilibrium rather than being based on a direct heme-heme communication as in native HbI.

摘要

不等齿毛蚶(Scapharca inaequivalvis)的同源二聚体血红蛋白HbI的亚基界面,通过一系列相互作用得以稳定,这些相互作用涉及多个氢键连接的结构水分子、一个疏水区域,以及残基Lys-30和Asp-89之间单一的对称盐桥。将Lys-30突变为Asp后,界面明显不稳定。沉降平衡和速度实验使得能够估算未结合配体时(K(1,2D) = 8×10⁴ M⁻¹)、结合CO时(K(1,2L) = 1×10³ M⁻¹)以及结合氧时(K(1,2L) = 70 M⁻¹)衍生物的二聚化常数。对于结合氧的衍生物,亚基界面相对于天然HbI的不稳定相当于约8千卡/摩尔,这一数值出乎意料地高。在K30D突变体中,与天然蛋白质不同,氧亲和力和协同性强烈依赖于蛋白质浓度。在低蛋白质浓度下(例如血红素浓度为1.2×10⁻⁵ M),此时单体形式在未结合配体的衍生物中也变得显著,氧亲和力增加而协同性降低。在两种衍生物均为二聚体的蛋白质浓度下(例如血红素浓度为3.3×10⁻³ M),协同性和氧亲和力均降低。综合来看,实验数据表明,在K30D突变体中,协同机制发生了剧烈改变,由配体连接的单体 - 二聚体平衡驱动,而非像天然HbI那样基于直接的血红素 - 血红素通讯。

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