González-Segura Lilian, Velasco-García Roberto, Muñoz-Clares Rosario A
Departamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, México DF, 04510, México.
Biochem J. 2002 Feb 1;361(Pt 3):577-85. doi: 10.1042/0264-6021:3610577.
Betaine aldehyde dehydrogenase (BADH) catalyses the irreversible NAD(P)(+)-dependent oxidation of betaine aldehyde to glycine betaine. In the human opportunistic pathogen Pseudomonas aeruginosa this reaction is an obligatory step in the assimilation of carbon and nitrogen when bacteria are growing in choline or choline precursors. As with every aldehyde dehydrogenase studied so far, BADH possesses an essential cysteine residue involved in the formation of the intermediate thiohemiacetal with the aldehyde substrate. We report here that the chemical modification of this residue is conveniently measured by the loss in enzyme activity, which allowed us to explore its reactivity in a pH range around neutrality. The pH dependence of the observed second-order rate constant of BADH inactivation by methyl methanethiosulphonate (MMTS) suggests that at low pH values the essential cysteine residue exists as thiolate by the formation of an ion pair with a positively charged residue. The estimated macroscopic pK values are 8.6 and 4.0 for the free and ion-pair-forming thiolate respectively. The reactivity towards MMTS of both thiolate forms is notably lower than that of model compounds of similar pK, suggesting a considerable steric inhibition by the structure of the protein. Binding of the dinucleotides rapidly induced a significant and transitory increment of thiolate reactivity, followed by a relatively slow change to an almost unreactive form. Thus it seems that to gain protection against oxidation without compromising catalytic efficiency, BADH from P. aeruginosa has evolved a complex and previously undescribed mechanism, involving several conformational rearrangements of the active site, to suit the reactivity of the essential thiol to the availability of coenzyme and substrate.
甜菜碱醛脱氢酶(BADH)催化甜菜碱醛不可逆地依赖NAD(P)(+)氧化为甘氨酸甜菜碱。在人类机会致病菌铜绿假单胞菌中,当细菌在胆碱或胆碱前体中生长时,该反应是碳和氮同化的必要步骤。与迄今为止研究的每种醛脱氢酶一样,BADH拥有一个必需的半胱氨酸残基,该残基参与与醛底物形成中间体硫代半缩醛。我们在此报告,该残基的化学修饰可通过酶活性的丧失方便地测定,这使我们能够在接近中性的pH范围内探索其反应性。甲基甲硫基磺酸盐(MMTS)使BADH失活的二级速率常数的pH依赖性表明,在低pH值下,必需的半胱氨酸残基通过与带正电荷的残基形成离子对而以硫醇盐形式存在。游离硫醇盐和形成离子对的硫醇盐的估计宏观pK值分别为8.6和4.0。两种硫醇盐形式对MMTS的反应性明显低于具有相似pK的模型化合物,这表明蛋白质结构存在相当大的空间抑制作用。二核苷酸的结合迅速诱导硫醇盐反应性显著且短暂增加,随后相对缓慢地转变为几乎无反应性的形式。因此,似乎为了在不影响催化效率的情况下获得抗氧化保护,铜绿假单胞菌的BADH进化出了一种复杂且前所未有的机制,涉及活性位点的几种构象重排,以使必需硫醇的反应性适应辅酶和底物的可用性。