• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

tRNA(Pro) 同工受体的失衡会在近同源密码子处诱导 +1 移码。

Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

作者信息

O'Connor Michael

机构信息

J. W. Wilson Laboratory, Department of Molecular and Cellular Biology and Biochemistry, 69 Brown Street, Brown University, Providence, RI 02912, USA. michael_o'

出版信息

Nucleic Acids Res. 2002 Feb 1;30(3):759-65. doi: 10.1093/nar/30.3.759.

DOI:10.1093/nar/30.3.759
PMID:11809889
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC100296/
Abstract

Increased expression of the CCU/CCA/CCG-decoding tRNA(Pr)(o)3 on a multicopy plasmid leads to suppression of several +1 frameshift mutations in Salmonella enterica serovar Typhimurium. Systematic analysis of the site of frameshifting indicates that excess tRNA(Pr)(o)3 promotes near-cognate decoding at CCC codons. Re-phasing of the reading frame can be achieved by a subsequent slippage of the tRNA onto a cognate codon in the +1 reading frame. Frameshifting appears to be due to an imbalance of CCC-cognate and near-cognate tRNAs, as the effect of excess tRNA(Pr)(o)3 on reading frame maintenance can be reversed by increasing simultaneously the concentration of the cognate tRNA(Pr)(o)2. Finally, the cmo5U modification present at position 34 of tRNA(Pr)(o)3, which allows this tRNA to decode CCU in addition to CCG and CCA, also affects frameshifting, indicating that the ability of the near-cognate tRNA to decode a cognate codon efficiently in the alternative reading frame is important for re-phasing of the reading frame.

摘要

在多拷贝质粒上增加CCU/CCA/CCG解码tRNA(Pr)(o)3的表达会导致鼠伤寒沙门氏菌中几个+1移码突变的抑制。对移码位点的系统分析表明,过量的tRNA(Pr)(o)3促进了CCC密码子处的近同源解码。阅读框的重新相位可通过tRNA随后滑入+1阅读框中的同源密码子来实现。移码似乎是由于CCC同源tRNA和近同源tRNA的不平衡所致,因为通过同时增加同源tRNA(Pr)(o)2的浓度,可以逆转过量tRNA(Pr)(o)3对阅读框维持的影响。最后,tRNA(Pr)(o)3第34位存在的cmo5U修饰,使该tRNA除了解码CCG和CCA外还能解码CCU,这也影响移码,表明近同源tRNA在替代阅读框中有效解码同源密码子的能力对于阅读框的重新相位很重要。

相似文献

1
Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.tRNA(Pro) 同工受体的失衡会在近同源密码子处诱导 +1 移码。
Nucleic Acids Res. 2002 Feb 1;30(3):759-65. doi: 10.1093/nar/30.3.759.
2
Structural alterations far from the anticodon of the tRNAProGGG of Salmonella typhimurium induce +1 frameshifting at the peptidyl-site.鼠伤寒沙门氏菌tRNAProGGG反密码子远端的结构改变会在肽基位点诱导+1移码。
J Mol Biol. 1997 Nov 14;273(5):978-92. doi: 10.1006/jmbi.1997.1363.
3
Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation.鼠伤寒沙门氏菌转运RNA中1-甲基鸟苷的缺乏通过四联体易位诱导移码。
J Mol Biol. 1993 Aug 5;232(3):756-65. doi: 10.1006/jmbi.1993.1429.
4
The modified wobble nucleoside uridine-5-oxyacetic acid in tRNAPro(cmo5UGG) promotes reading of all four proline codons in vivo.转运核糖核酸Pro(cmo5UGG)中经过修饰的摆动核苷尿苷-5-氧乙酸可促进体内所有四种脯氨酸密码子的读取。
RNA. 2004 Oct;10(10):1662-73. doi: 10.1261/rna.7106404.
5
Insertion (sufB) in the anticodon loop or base substitution (sufC) in the anticodon stem of tRNA(Pro)2 from Salmonella typhimurium induces suppression of frameshift mutations.鼠伤寒沙门氏菌tRNA(Pro)2反密码子环中的插入(sufB)或反密码子茎中的碱基替换(sufC)可诱导移码突变的抑制。
Nucleic Acids Res. 1992 Jul 11;20(13):3463-9. doi: 10.1093/nar/20.13.3463.
6
A new model for phenotypic suppression of frameshift mutations by mutant tRNAs.一种通过突变型tRNA对移码突变进行表型抑制的新模型。
Mol Cell. 1998 Mar;1(4):471-82. doi: 10.1016/s1097-2765(00)80048-9.
7
Seven, eight and nine-membered anticodon loop mutants of tRNA(2Arg) which cause +1 frameshifting. Tolerance of DHU arm and other secondary mutations.导致 +1 移码的 tRNA(2Arg) 的七元、八元和九元反密码子环突变体。二氢尿嘧啶臂的耐受性及其他二级突变。
J Mol Biol. 1992 Dec 20;228(4):1042-54. doi: 10.1016/0022-2836(92)90313-9.
8
A cytosolic tRNA with an unmodified adenosine in the wobble position reads a codon ending with the non-complementary nucleoside cytidine.一种在摆动位置带有未修饰腺苷的胞质tRNA读取以非互补核苷胞苷结尾的密码子。
J Mol Biol. 2002 Apr 5;317(4):481-92. doi: 10.1006/jmbi.2002.5435.
9
Bacillus subtilis tRNA(Pro) with the anticodon mo5UGG can recognize the codon CCC.带有反密码子mo5UGG的枯草芽孢杆菌tRNA(Pro)能够识别密码子CCC。
Biochim Biophys Acta. 2005 May 1;1728(3):143-9. doi: 10.1016/j.bbaexp.2005.02.011. Epub 2005 Mar 22.
10
tRNA imbalance promotes -1 frameshifting via near-cognate decoding.转运RNA失衡通过近同源解码促进-1移码。
J Mol Biol. 1998 Jun 19;279(4):727-36. doi: 10.1006/jmbi.1998.1832.

引用本文的文献

1
An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting.一种RNA修饰可防止延长的密码子-反密码子相互作用促进+1移码。
Nat Commun. 2025 Aug 11;16(1):7392. doi: 10.1038/s41467-025-62342-4.
2
N-methylpseudouridylation of mRNA causes +1 ribosomal frameshifting.mRNA 的 N-甲基假尿嘧啶化导致+1 核糖体移码。
Nature. 2024 Jan;625(7993):189-194. doi: 10.1038/s41586-023-06800-3. Epub 2023 Dec 6.
3
Twice exploration of tRNA +1 frameshifting in an elongation cycle of protein synthesis.在蛋白质合成的延伸循环中对 tRNA+1 移码的两次探索。
Nucleic Acids Res. 2021 Sep 27;49(17):10046-10060. doi: 10.1093/nar/gkab734.
4
Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.EF-G 催化转位过程中+1 核糖体移码的结构基础。
Nat Commun. 2021 Jul 30;12(1):4644. doi: 10.1038/s41467-021-24911-1.
5
Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon-anticodon pairing.结构视角下 tRNA 修饰和滑突密码子-反密码子配对对 mRNA 阅读框调控的研究。
Elife. 2020 Oct 5;9:e51898. doi: 10.7554/eLife.51898.
6
Antibiotic resistance by high-level intrinsic suppression of a frameshift mutation in an essential gene.高水平内在抑制必需基因移码突变导致的抗生素耐药性。
Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):3185-3191. doi: 10.1073/pnas.1919390117. Epub 2020 Jan 28.
7
Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in for decoding.tRNA 反密码子环修饰和保守的非规范反密码子茎配对在解码中的重要性。
J Biol Chem. 2019 Apr 5;294(14):5281-5291. doi: 10.1074/jbc.RA119.007410. Epub 2019 Feb 19.
8
Mechanism of tRNA-mediated +1 ribosomal frameshifting.tRNA 介导的+1 核糖体移码机制。
Proc Natl Acad Sci U S A. 2018 Oct 30;115(44):11226-11231. doi: 10.1073/pnas.1809319115. Epub 2018 Sep 27.
9
Discrepancy among the synonymous codons with respect to their selection as optimal codon in bacteria.细菌中同义密码子在被选为最优密码子方面存在差异。
DNA Res. 2016 Oct 1;23(5):441-449. doi: 10.1093/dnares/dsw027.
10
Two groups of phenylalanine biosynthetic operon leader peptides genes: a high level of apparently incidental frameshifting in decoding Escherichia coli pheL.两组苯丙氨酸生物合成操纵子启动肽基因:大肠杆菌 pheL 基因解码中明显偶然的读框移码的高频率。
Nucleic Acids Res. 2011 Apr;39(8):3079-92. doi: 10.1093/nar/gkq1272. Epub 2010 Dec 21.

本文引用的文献

1
Acetylornithinase of Escherichia coli: partial purification and some properties.大肠杆菌的乙酰鸟氨酸酶:部分纯化及某些性质
J Biol Chem. 1956 Jan;218(1):97-106.
2
Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of "shifty" four-base codons with a library approach in Escherichia coli.扩展遗传密码:利用文库方法在大肠杆菌中筛选四碱基密码子的高效抑制子并鉴定“易变”四碱基密码子
J Mol Biol. 2001 Mar 30;307(3):755-69. doi: 10.1006/jmbi.2001.4518.
3
In vivo misreading by tRNA overdose.体内因tRNA过量导致的错读。
RNA. 2000 Jan;6(1):103-10. doi: 10.1017/s1355838200991714.
4
How translational accuracy influences reading frame maintenance.翻译准确性如何影响阅读框维持。
EMBO J. 1999 Mar 15;18(6):1427-34. doi: 10.1093/emboj/18.6.1427.
5
A new model for phenotypic suppression of frameshift mutations by mutant tRNAs.一种通过突变型tRNA对移码突变进行表型抑制的新模型。
Mol Cell. 1998 Mar;1(4):471-82. doi: 10.1016/s1097-2765(00)80048-9.
6
tRNA imbalance promotes -1 frameshifting via near-cognate decoding.转运RNA失衡通过近同源解码促进-1移码。
J Mol Biol. 1998 Jun 19;279(4):727-36. doi: 10.1006/jmbi.1998.1832.
7
Structural alterations far from the anticodon of the tRNAProGGG of Salmonella typhimurium induce +1 frameshifting at the peptidyl-site.鼠伤寒沙门氏菌tRNAProGGG反密码子远端的结构改变会在肽基位点诱导+1移码。
J Mol Biol. 1997 Nov 14;273(5):978-92. doi: 10.1006/jmbi.1997.1363.
8
Growth rate-optimised tRNA abundance and codon usage.生长速率优化的tRNA丰度与密码子使用情况。
J Mol Biol. 1997 Jul 25;270(4):544-50. doi: 10.1006/jmbi.1997.1142.
9
High-level misincorporation of lysine for arginine at AGA codons in a fusion protein expressed in Escherichia coli.在大肠杆菌中表达的融合蛋白中,赖氨酸在AGA密码子处高水平错掺入精氨酸。
J Mol Biol. 1996 Oct 4;262(4):407-12. doi: 10.1006/jmbi.1996.0524.
10
Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.不同生长速率下大肠杆菌中tRNA丰度与密码子使用的共变关系。
J Mol Biol. 1996 Aug 2;260(5):649-63. doi: 10.1006/jmbi.1996.0428.