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含Na⁺抗衡离子的二棕榈酰磷脂酰丝氨酸双层膜的分子动力学模拟

Molecular dynamics simulation of dipalmitoylphosphatidylserine bilayer with Na+ counterions.

作者信息

Pandit Sagar A, Berkowitz Max L

机构信息

Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599, USA.

出版信息

Biophys J. 2002 Apr;82(4):1818-27. doi: 10.1016/S0006-3495(02)75532-X.

DOI:10.1016/S0006-3495(02)75532-X
PMID:11916841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1301979/
Abstract

We performed a molecular dynamics simulation of dipalmitoylphosphatidylserine (DPPS) bilayer with Na+ counterions. We found that hydrogen bonding between the NH group and the phosphate group leads to a reduction in the area per headgroup when compared to the area in dipalmitoylphosphatidylcholine bilayer. The Na+ ions bind to the oxygen in the carboxyl group of serine, thus giving rise to a dipolar bilayer similar to dipalmitoylphosphatidylethanolamine bilayer. The results of the simulation show that counterions play a crucial role in determining the structural and electrostatic properties of DPPS bilayer.

摘要

我们对含有Na⁺抗衡离子的二棕榈酰磷脂酰丝氨酸(DPPS)双层进行了分子动力学模拟。我们发现,与二棕榈酰磷脂酰胆碱双层中的面积相比,NH基团与磷酸基团之间的氢键导致每个头基的面积减小。Na⁺离子与丝氨酸羧基中的氧结合,从而形成类似于二棕榈酰磷脂酰乙醇胺双层的偶极双层。模拟结果表明,抗衡离子在决定DPPS双层的结构和静电性质方面起着关键作用。