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用于研究实验室和工业酵母菌株中基因组重排的工具。

Tools for the study of genome rearrangements in laboratory and industrial yeast strains.

作者信息

Lockhart Lesley, Oliver Stephen G, Delneri Daniela

机构信息

School of Biological Sciences, University of Manchester, 2.205 Stopford Building, Oxford Road, Manchester M13 9PT, UK.

出版信息

Yeast. 2002 Mar 30;19(5):441-8. doi: 10.1002/yea.852.

DOI:10.1002/yea.852
PMID:11921092
Abstract

In order to investigate the extent of genome rearrangements in laboratory and industrial yeast strains, a set of plasmids, containing ca. 300 bp fragments from highly conserved genes from S. cerevisiae, has been constructed. We chose three unique PCR products, each from a single gene, per chromosome: one from close to the centromere, and one from each chromosome end. Using these plasmids as probes to hybridize a Southern blot from a pulsed-field gel electrophoresis separation of the 16 yeast chromosomes, it is possible to identify large chromosomal rearrangements such as reciprocal translocations.

摘要

为了研究实验室和工业酵母菌株中基因组重排的程度,已构建了一组质粒,这些质粒包含来自酿酒酵母高度保守基因的约300 bp片段。我们在每条染色体上选择了三个独特的PCR产物,每个产物来自单个基因:一个来自靠近着丝粒的位置,另一个来自每条染色体的末端。使用这些质粒作为探针,与通过脉冲场凝胶电泳分离16条酵母染色体得到的Southern印迹杂交,就有可能识别出大型染色体重排,如相互易位。

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引用本文的文献

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Appl Environ Microbiol. 2006 Jun;72(6):3968-74. doi: 10.1128/AEM.02769-05.
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Comparative genomic hybridization provides new insights into the molecular taxonomy of the Saccharomyces sensu stricto complex.比较基因组杂交为狭义酿酒酵母复合体的分子分类学提供了新的见解。
Genome Res. 2004 Jun;14(6):1043-51. doi: 10.1101/gr.2114704.