• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

小RNA的参与以及qde基因在粗糙脉孢菌基因沉默途径中的作用。

Involvement of small RNAs and role of the qde genes in the gene silencing pathway in Neurospora.

作者信息

Catalanotto Caterina, Azzalin Gianluca, Macino Giuseppe, Cogoni Carlo

机构信息

Dipartimento di Biotecnologie Cellulari ed Ematologia, Sezione di Genetica Molecolare, Università di Roma La Sapienza, 00161 Roma, Italy.

出版信息

Genes Dev. 2002 Apr 1;16(7):790-5. doi: 10.1101/gad.222402.

DOI:10.1101/gad.222402
PMID:11937487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC186333/
Abstract

Small RNA molecules have been found to be specifically associated with posttranscriptional gene silencing (PTGS) in both plants and animals. Here, we find that small sense and antisense RNAs are also involved in PTGS in Neurospora crassa. The accumulation of these RNA molecules depends on the presence of functional qde-1 and qde-3 genes previously shown to be essential for gene silencing, but does not depend on a functional qde-2, indicating that this gene is involved in a downstream step of the gene silencing pathway. Supporting this idea, a purified QDE2 protein complex was found to contain small RNA molecules, suggesting that QDE2 could be part of a small RNA-directed ribonuclease complex involved in sequence-specific mRNA degradation.

摘要

人们发现,小RNA分子在植物和动物中均与转录后基因沉默(PTGS)存在特异性关联。在此,我们发现小正义RNA和反义RNA也参与了粗糙脉孢菌中的PTGS。这些RNA分子的积累依赖于功能性qde-1和qde-3基因的存在,先前研究表明这两个基因对基因沉默至关重要,但不依赖于功能性qde-2,这表明该基因参与基因沉默途径的下游步骤。支持这一观点的是,纯化的QDE2蛋白复合物被发现含有小RNA分子,这表明QDE2可能是参与序列特异性mRNA降解的小RNA导向核糖核酸酶复合物的一部分。

相似文献

1
Involvement of small RNAs and role of the qde genes in the gene silencing pathway in Neurospora.小RNA的参与以及qde基因在粗糙脉孢菌基因沉默途径中的作用。
Genes Dev. 2002 Apr 1;16(7):790-5. doi: 10.1101/gad.222402.
2
The RNA-dependent RNA polymerase, QDE-1, is a rate-limiting factor in post-transcriptional gene silencing in Neurospora crassa.RNA依赖的RNA聚合酶QDE-1是粗糙脉孢菌转录后基因沉默中的一个限速因子。
Nucleic Acids Res. 2004 Apr 16;32(7):2123-8. doi: 10.1093/nar/gkh530. Print 2004.
3
Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase.粗糙脉孢菌中的基因沉默需要一种与RNA依赖性RNA聚合酶同源的蛋白质。
Nature. 1999 May 13;399(6732):166-9. doi: 10.1038/20215.
4
Gene silencing pathway RNA-dependent RNA polymerase of Neurospora crassa: yeast expression and crystallization of selenomethionated QDE-1 protein.粗糙脉孢菌基因沉默途径中的RNA依赖性RNA聚合酶:硒代甲硫氨酸化QDE-1蛋白的酵母表达与结晶
J Struct Biol. 2005 Jan;149(1):111-5. doi: 10.1016/j.jsb.2004.10.001.
5
AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals.AGO1、QDE-2和RDE-1是植物转录后基因沉默、真菌中的基因压制以及动物中的RNA干扰所必需的相关蛋白。
Proc Natl Acad Sci U S A. 2000 Oct 10;97(21):11650-4. doi: 10.1073/pnas.200217597.
6
RNA silencing in fungi: mechanisms and applications.真菌中的RNA沉默:机制与应用
FEBS Lett. 2005 Oct 31;579(26):5950-7. doi: 10.1016/j.febslet.2005.08.016. Epub 2005 Aug 24.
7
Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes.参与转录后基因沉默的细胞RNA依赖性RNA聚合酶具有两种不同的活性模式。
Mol Cell. 2002 Dec;10(6):1417-27. doi: 10.1016/s1097-2765(02)00780-3.
8
An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus.拟南芥中的一个依赖RNA的RNA聚合酶基因对于由转基因介导而非病毒介导的转录后基因沉默是必需的。
Cell. 2000 May 26;101(5):543-53. doi: 10.1016/s0092-8674(00)80864-8.
9
Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa.粗糙脉孢菌中转录后转基因诱导基因沉默受损的抑制缺陷(qde)突变体的分离。
Proc Natl Acad Sci U S A. 1997 Sep 16;94(19):10233-8. doi: 10.1073/pnas.94.19.10233.
10
The post-transcriptional gene silencing machinery functions independently of DNA methylation to repress a LINE1-like retrotransposon in Neurospora crassa.转录后基因沉默机制独立于DNA甲基化发挥作用,以抑制粗糙脉孢菌中一种类似LINE1的逆转座子。
Nucleic Acids Res. 2005 Mar 14;33(5):1564-73. doi: 10.1093/nar/gki300. Print 2005.

引用本文的文献

1
Non-coding RNA notations, regulations and interactive resources.非编码 RNA 符号、规范和交互资源。
Funct Integr Genomics. 2024 Nov 18;24(6):217. doi: 10.1007/s10142-024-01494-w.
2
Challenges and Opportunities Arising from Host- Interactions to Outline Novel and Sustainable Control Strategies: The Key Role of RNA Interference.从宿主相互作用中出现的挑战和机遇概述新的和可持续的控制策略:RNA 干扰的关键作用。
Int J Mol Sci. 2024 Jun 20;25(12):6798. doi: 10.3390/ijms25126798.
3
The RNAi Machinery in the Fungus Is Not Very Active in Synthetic Medium and Is Related to Transposable Elements.真菌中的RNA干扰机制在合成培养基中活性不高且与转座元件有关。
Noncoding RNA. 2024 May 16;10(3):31. doi: 10.3390/ncrna10030031.
4
Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.两桶 RNA 聚合酶 QDE-1 的双重活性的结构见解。
Nucleic Acids Res. 2022 Sep 23;50(17):10169-10186. doi: 10.1093/nar/gkac727.
5
RNA-induced initiation of transcriptional silencing (RITS) complex structure and function.RNA 诱导的转录沉默起始复合物的结构与功能
RNA Biol. 2019 Sep;16(9):1133-1146. doi: 10.1080/15476286.2019.1621624. Epub 2019 Jun 18.
6
A fungal milRNA mediates epigenetic repression of a virulence gene in Verticillium dahliae.一种真菌 milRNA 介导Verticillium dahliae 中一个毒力基因的表观遗传抑制。
Philos Trans R Soc Lond B Biol Sci. 2019 Mar 4;374(1767):20180309. doi: 10.1098/rstb.2018.0309.
7
Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes.植物通过细胞外囊泡向真菌病原体发送小 RNA,从而沉默致病基因。
Science. 2018 Jun 8;360(6393):1126-1129. doi: 10.1126/science.aar4142. Epub 2018 May 17.
8
MicroRNA-like RNAs in plant pathogenic fungus f. sp. are involved in toxin gene expression fine tuning.植物病原真菌中的类微小RNA参与毒素基因表达的精细调控。
3 Biotech. 2017 Oct;7(5):354. doi: 10.1007/s13205-017-0951-y. Epub 2017 Sep 27.
9
Comprehensive analysis of microRNA-Seq and target mRNAs of rice sheath blight pathogen provides new insights into pathogenic regulatory mechanisms.水稻纹枯病菌的microRNA-Seq及靶标mRNA的综合分析为致病调控机制提供了新见解。
DNA Res. 2016 Oct 1;23(5):415-425. doi: 10.1093/dnares/dsw024.
10
Novel Intronic RNA Structures Contribute to Maintenance of Phenotype in Saccharomyces cerevisiae.新型内含子RNA结构有助于酿酒酵母表型的维持。
Genetics. 2016 Jul;203(3):1469-81. doi: 10.1534/genetics.115.185363. Epub 2016 May 18.

本文引用的文献

1
On the role of RNA amplification in dsRNA-triggered gene silencing.RNA扩增在双链RNA引发的基因沉默中的作用
Cell. 2001 Nov 16;107(4):465-76. doi: 10.1016/s0092-8674(01)00576-1.
2
RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs.RNA干扰即随机降解性PCR:小干扰RNA引物将信使核糖核酸转化为双链核糖核酸,双链核糖核酸被降解以产生新的小干扰RNA。
Cell. 2001 Nov 2;107(3):297-307. doi: 10.1016/s0092-8674(01)00537-2.
3
An extensive class of small RNAs in Caenorhabditis elegans.秀丽隐杆线虫中一类广泛的小RNA。
Science. 2001 Oct 26;294(5543):862-4. doi: 10.1126/science.1065329.
4
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.一类在秀丽隐杆线虫中可能具有调控作用的丰富的微小RNA。
Science. 2001 Oct 26;294(5543):858-62. doi: 10.1126/science.1065062.
5
Identification of novel genes coding for small expressed RNAs.编码小表达RNA的新基因的鉴定。
Science. 2001 Oct 26;294(5543):853-8. doi: 10.1126/science.1064921.
6
RNA interference: listening to the sound of silence.RNA干扰:聆听沉默之声。
Nat Struct Biol. 2001 Sep;8(9):746-50. doi: 10.1038/nsb0901-746.
7
Argonaute2, a link between genetic and biochemical analyses of RNAi.AGO2蛋白,RNA干扰的遗传学与生物化学分析之间的联系。
Science. 2001 Aug 10;293(5532):1146-50. doi: 10.1126/science.1064023.
8
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.与RNA干扰相关的基因和机制调控着控制秀丽隐杆线虫发育时间的小时间RNA的表达。
Cell. 2001 Jul 13;106(1):23-34. doi: 10.1016/s0092-8674(01)00431-7.
9
Gene silencing as an adaptive defence against viruses.基因沉默作为一种针对病毒的适应性防御机制。
Nature. 2001 Jun 14;411(6839):834-42. doi: 10.1038/35081168.
10
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.21个核苷酸的RNA双链体在培养的哺乳动物细胞中介导RNA干扰。
Nature. 2001 May 24;411(6836):494-8. doi: 10.1038/35078107.