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对称底物2,4-二甲基氘代血红素的氰化物抑制型人血红素加氧酶复合物活性位点中异常远端氢键网络的溶液核磁共振表征

Solution NMR characterization of an unusual distal H-bond network in the active site of the cyanide-inhibited, human heme oxygenase complex of the symmetric substrate, 2,4-dimethyldeuterohemin.

作者信息

Li Yiming, Syvitski Ray T, Auclair Karine, Wilks Angela, Ortiz De Montellano Paul R, La Mar Gerd N

机构信息

Department of Chemistry, University of California, Davis, California 95616, USA.

出版信息

J Biol Chem. 2002 Sep 6;277(36):33018-31. doi: 10.1074/jbc.M204216200. Epub 2002 Jun 17.

Abstract

The presence of variable static hemin orientational disorder about the alpha-gamma-meso axis in the substrate complexes of mammalian heme oxygenase, together with the incomplete averaging of a second, dynamic disorder, for each hemin orientation, has led to NMR spectra with severe spectral overlap and loss of key two-dimensional correlations that seriously interfere with structural characterization in solution. We demonstrate that the symmetric substrate, 2,4-dimethyldeuterohemin, yields a single solution species for which the dynamic disorder is sufficiently rapid to allow effective and informative (1)H NMR structural characterization. A much more extensive, effective, and definitive NMR characterization of the cyanide-inhibited, symmetric heme complex of human heme oxygenase shows that the active site structure, with some minor differences, is essentially the same as that for the native protohemin in solution and crystal. A unique distal network that involves particularly strong hydrogen bonds, as well as inter-aromatic contacts, is described that is proposed to stabilize the position of the catalytically critical distal helix Asp-140 carboxylate (Liu, Y., Koenigs Lightning, L., Huang, H., Moënne-Loccoz, P., Schuller, D. J., Poulos, T. L., Loehr, T. M., and Ortiz de Montellano, P. R. (2000) J. Biol. Chem. 275, 34501-34507). The potential role of this network in placing a water molecule to stabilize the hydroperoxy species and as a template for the condensation of the distal helix upon substrate binding are discussed.

摘要

哺乳动物血红素加氧酶底物复合物中,围绕α-γ-中位轴存在可变的静态血红素取向无序,并且对于每个血红素取向,第二种动态无序的平均化不完全,这导致核磁共振谱具有严重的谱重叠以及关键二维相关性的丧失,严重干扰了溶液中的结构表征。我们证明,对称底物2,4-二甲基氘代血红素产生单一的溶液物种,其动态无序足够快,能够进行有效且信息丰富的¹H核磁共振结构表征。对人血红素加氧酶的氰化物抑制的对称血红素复合物进行的更广泛、有效且明确的核磁共振表征表明,活性位点结构虽有一些细微差异,但与溶液和晶体中的天然原血红素基本相同。描述了一个独特的远端网络,该网络涉及特别强的氢键以及芳环间接触,有人提出该网络可稳定催化关键的远端螺旋天冬氨酸-140羧酸盐的位置(Liu, Y., Koenigs Lightning, L., Huang, H., Moënne-Loccoz, P., Schuller, D. J., Poulos, T. L., Loehr, T. M., and Ortiz de Montellano, P. R. (2000) J. Biol. Chem. 275, 34501 - 34507)。讨论了该网络在放置水分子以稳定氢过氧物种以及作为底物结合时远端螺旋缩合模板方面的潜在作用。

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