Bandarian Vahe, Reed George H
Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53705, USA.
Biochemistry. 2002 Jul 9;41(27):8580-8. doi: 10.1021/bi0201217.
The structure of the steady-state radical intermediate in the deamination of S-2-aminopropanol catalyzed by ethanolamine ammonia-lyase (EAL) from Salmonella typhimurium has been probed by electron paramagnetic resonance (EPR) spectroscopy using isotopically labeled forms of the substrate and of the adenosylcobalamin cofactor. Electron spin-spin coupling between the radical, centered on the carbon skeleton of the substrate, and the low-spin Co(2+) in cob(II)alamin (B(12r)) produces a dominant splitting of the EPR signals of both the radical and the Co(2+). Analysis of the exchange and dipole-dipole contributions to the spin-spin coupling indicates that the two paramagnetic centers are separated by approximately 11 A. Experiments with (13)C- and with (2)H-labeled forms of S-2-aminopropanol show that the radical is centered on C1 of the carbon skeleton of the substrate in agreement with an earlier report [Babior, B. M., Moss, T. H., Orme-Johnson, W. H., and Beinert, H., (1974) J. Biol. Chem. 249, 4537-4544]. Experiments with perdeutero-S-2-aminopropanol and [2-(15)N]-perdeutero-S-2-aminopropanol reveal a strong hyperfine splitting from the substrate nitrogen, which indicates that the radical is the initial substrate radical created by abstraction of a hydrogen atom from C1 of S-2-aminopropanol. The strong nitrogen hyperfine splitting further indicates that the amino substituent at C2 is approximately eclipsed with respect to the half-occupied p orbital at C1. Experiments with adenosylcobalamin enriched in (15)N in the dimethylbenzimidazole moiety show that the axial base of the cofactor remains attached to the Co(2+) in a functional steady-state reaction intermediate.
利用底物和腺苷钴胺辅因子的同位素标记形式,通过电子顺磁共振(EPR)光谱法探究了鼠伤寒沙门氏菌乙醇胺氨裂解酶(EAL)催化S-2-氨基丙醇脱氨反应中稳态自由基中间体的结构。以底物碳骨架为中心的自由基与钴胺素(B(12r))中的低自旋Co(2+)之间的电子自旋-自旋耦合,产生了自由基和Co(2+)的EPR信号的主要分裂。对自旋-自旋耦合的交换和偶极-偶极贡献的分析表明,两个顺磁中心相距约11 Å。用(13)C和(2)H标记的S-2-氨基丙醇进行的实验表明,自由基以底物碳骨架的C1为中心,这与早期的报道一致[巴比奥尔,B.M.,莫斯,T.H.,奥姆-约翰逊,W.H.,和贝纳特,H.,(1974)《生物化学杂志》249, 4537 - 4544]。用全氘代-S-2-氨基丙醇和[2-(15)N]-全氘代-S-2-氨基丙醇进行的实验揭示了来自底物氮的强烈超精细分裂,这表明该自由基是通过从S-2-氨基丙醇的C1上夺取一个氢原子而产生的初始底物自由基。强烈的氮超精细分裂进一步表明,C2处的氨基取代基相对于C1处半充满的p轨道大致呈重叠构象。用在二甲基苯并咪唑部分富含(15)N的腺苷钴胺进行的实验表明,在功能性稳态反应中间体中,辅因子的轴向碱基仍与Co(2+)相连。