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与十二烷基硫酸钠(SDS)胶束结合的PW2的核磁共振(NMR)结构。一种从噬菌体展示文库中筛选出的富含色氨酸的抗球虫肽。

NMR structure of PW2 bound to SDS micelles. A tryptophan-rich anticoccidial peptide selected from phage display libraries.

作者信息

Tinoco Luzineide W, Da Silva Arnaldo, Leite Adilson, Valente Ana Paula, Almeida Fabio C L

机构信息

Centro Nacional de Ressonância Magnética Nuclear, Departamento de Bioquimica Médica - Instituto de Ciencias Biomedicas, Universidade Federal do Rio de Janeiro, 21941-590 - Rio de Janeiro, RJ, Brazil.

出版信息

J Biol Chem. 2002 Sep 27;277(39):36351-6. doi: 10.1074/jbc.M204225200. Epub 2002 Jul 18.

DOI:10.1074/jbc.M204225200
PMID:12130641
Abstract

PW2 (HPLKQYWWRPSI) was selected from phage display libraries through an alternative panning method using living sporozoites of Eimeria acervulina as target. Synthetic PW2 shows anticoccidial activity against E. acervulina and Eimeria tenella with very low hemolytic activity. It also displays antifungal activity but no activity against bacteria. We present the solution structure of the PW2 bound to SDS micelles. In the absence of an interface, PW2 is in random coil conformation. In micelles, structural calculation shows that Trp-7 forms the hydrophobic core that is important for the peptide folding. Lys-4, Tyr-6, Trp-8, and Arg-9 are in the same surface, possibly facing the micelle interface. This possibility was supported by the fact that chemical shift differences for these residues were more pronounced when compared with PW2 in water and in SDS. PW2 gains structure upon binding to SDS micelles. Lys-4, Tyr-6, Trp-8, and Arg-9 were found to bind to the micelle. Trp-7, Trp-8, and Arg-9 composed the WW+ consensus found in the sequence of the peptides selected with the phage display technique against E. acervulina sporozoites. This suggested that Trp-7, Trp-8, and Arg-9 are probably key residues not only for the peptide interaction with SDS micelles but also for the interaction with E. acervulina sporozoites surface.

摘要

通过一种替代淘选方法,以堆型艾美耳球虫的活子孢子为靶标,从噬菌体展示文库中筛选出了PW2(HPLKQYWWRPSI)。合成的PW2对堆型艾美耳球虫和柔嫩艾美耳球虫显示出抗球虫活性,且溶血活性极低。它还具有抗真菌活性,但对细菌无活性。我们展示了与十二烷基硫酸钠(SDS)胶束结合的PW2的溶液结构。在没有界面的情况下,PW2呈无规卷曲构象。在胶束中,结构计算表明,色氨酸-7形成了对肽折叠很重要的疏水核心。赖氨酸-4、酪氨酸-6、色氨酸-8和精氨酸-9位于同一表面,可能面向胶束界面。与水中和SDS中的PW2相比,这些残基的化学位移差异更明显,这一事实支持了这种可能性。PW2与SDS胶束结合后获得结构。发现赖氨酸-4、酪氨酸-6、色氨酸-8和精氨酸-9与胶束结合。色氨酸-7、色氨酸-8和精氨酸-9构成了用噬菌体展示技术针对堆型艾美耳球虫子孢子筛选出的肽序列中发现的WW+共有序列。这表明色氨酸-7、色氨酸-8和精氨酸-9可能不仅是肽与SDS胶束相互作用的关键残基,也是与堆型艾美耳球虫子孢子表面相互作用的关键残基。

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