Semenova S K, Illarionova N A, Vasil'ev V A, Shubkina A V, Ryskov A P
Institute of Gene Biology, Russian Academy of Sciences, Moscow, 117334 Russia.
Genetika. 2002 Jun;38(6):842-52.
The method of polymerase chain reaction with a set of arbitrary primers (RAPD-PCR) was used to describe genetic variation and to estimate genetic diversity in East-European swift hounds, Russian Psovyi and Hortyi Borzois. For comparison, swift hounds of two West-European breeds (Whippet and Greyhound) and single dogs of other breed groups (shepherd, terriers, mastiffs, and bird dogs) were examined. For all dog groups, their closest related species, the wolf Canis lupus, was used as an outgroup. Variation of RAPD markers was studied at several hierarchic levels: intra- and interfamily (for individual families of Russian Psovyi and Hortyi Borzois), intra- and interbreed (for ten dog breeds), and interspecific (C. familiaris-C. lupus). In total, 57 dogs and 4 wolfs were studied. Using RAPD-PCR with three primers, 93 DNA fragments with a length of 150-1500 bp were detected in several Borzoi families with known filiation. These fragments were found to be inherited as dominant markers and to be applicable for estimation of genetic differences between parents and their offspring and for comparison of individuals and families with different level of inbreeding. A high level of intra- and interbreed variation was found in Russian Psovyi and Hortyi Borzois. In these dog groups, genetic similarity indices varied in a range of 72.2 to 93.4% (parents-offspring) and 68.0 to 94.5 (sibs). Based on the patterns of RAPD markers obtained using six primers, a dendrogram of genetic similarity between the wolf and different dog breeds was constructed, and indices of intragroup diversity were calculated. All studied breeds were found to fall into two clusters, swift hounds (Borzoi-like dogs) and other dogs. Russian Borzois represent a very heterogeneous group, in which the Russian Psovyi Borzoi is closer to Greyhound than the Russian Hortyi Borzoi. All studied wolfs constituted a separate cluster. Significant differences were found between the wolf and dogs by the number of RAPD markers (92.8 and 86.1, respectively) and by the indices of genetic diversity (54.3 and 64.8%, respectively). The reasons for the high intraspecific variation of dogs (including Russian Borzois) and the prospects of using the studied group of markers for genetic analysis and differentiation in C. familiaris are discussed.
采用一组随机引物的聚合酶链反应方法(RAPD-PCR)来描述东欧灵缇犬、俄罗斯波索伊犬和霍尔蒂伊猎狼犬的遗传变异并估计其遗传多样性。为作比较,对两个西欧品种的灵缇犬(惠比特犬和灵缇犬)以及其他品种组的单只犬(牧羊犬、梗犬、獒犬和猎犬)进行了检测。对于所有犬组,将它们关系最近的物种——狼(Canis lupus)用作外类群。在几个层次水平上研究了RAPD标记的变异:家庭内和家庭间(针对俄罗斯波索伊犬和霍尔蒂伊猎狼犬的各个家庭)、品种内和品种间(针对十个犬种)以及种间(家犬-狼)。总共研究了57只犬和4只狼。使用三种引物进行RAPD-PCR,在几个有已知谱系的猎狼犬家庭中检测到93个长度为150 - 1500 bp的DNA片段。发现这些片段作为显性标记遗传,可用于估计亲本与其后代之间的遗传差异,以及比较不同近亲繁殖水平的个体和家庭。在俄罗斯波索伊犬和霍尔蒂伊猎狼犬中发现了高水平的品种内和品种间变异。在这些犬组中,遗传相似性指数在亲本-后代之间为72.2%至93.4%,在同胞之间为68.0%至94.5%。基于使用六种引物获得的RAPD标记模式,构建了狼与不同犬种之间的遗传相似性树状图,并计算了组内多样性指数。所有研究的品种被分为两个聚类,灵缇犬(类似猎狼犬的犬种)和其他犬种。俄罗斯猎狼犬代表一个非常异质的群体,其中俄罗斯波索伊猎狼犬比俄罗斯霍尔蒂伊猎狼犬更接近灵缇犬。所有研究的狼构成一个单独的聚类。通过RAPD标记数量(分别为92.8和86.1)以及遗传多样性指数(分别为54.3%和64.8%)发现狼与犬之间存在显著差异。讨论了犬(包括俄罗斯猎狼犬)种内高变异的原因以及使用所研究的标记组进行家犬遗传分析和鉴别分类的前景。