van der Wel Patrick C A, Strandberg Erik, Killian J Antoinette, Koeppe Roger E
Department of Chemistry and Biochemistry, University of Arkansas, Fayetteville, Arkansas 72701 USA.
Biophys J. 2002 Sep;83(3):1479-88. doi: 10.1016/S0006-3495(02)73918-0.
We used solid-state deuterium NMR spectroscopy and an approach involving geometric analysis of labeled alanines (GALA method) to examine the structure and orientation of a designed synthetic hydrophobic, membrane-spanning alpha-helical peptide in phosphatidylcholine (PC) bilayers. The 19-amino-acid peptide consists of an alternating leucine and alanine core, flanked by tryptophans that serve as interfacial anchors: acetyl-GWW(LA)(6)LWWA-ethanolamine (WALP19). A single deuterium-labeled alanine was introduced at different positions within the peptide. Peptides were incorporated in oriented bilayers of dilauroyl- (di-C12:0-), dimyristoyl- (di-C14:0-), or dioleoyl- (di-C18:1(c)-) phosphatidylcholine. The NMR data fit well to a WALP19 orientation characterized by a distinctly nonzero tilt, approximately 4 degrees from the membrane normal, and rapid reorientation about the membrane normal in all three lipids. Although the orientation of WALP19 varies slightly in the different lipids, hydrophobic mismatch does not seem to be the dominant factor causing the tilt. We suggest rather that the peptide itself has an inherently preferred tilted orientation, possibly related to peptide surface characteristics or the disposition of tryptophan indole anchors relative to the lipids, the peptide backbone, and the membrane/water interface. Additionally, the data allow us to define more precisely the local alanine geometry in this membrane-spanning alpha-helix.
我们使用固态氘核磁共振光谱法以及一种涉及标记丙氨酸几何分析的方法(GALA方法),来研究一种设计合成的疏水跨膜α-螺旋肽在磷脂酰胆碱(PC)双层膜中的结构和取向。这条由19个氨基酸组成的肽包含一个亮氨酸和丙氨酸交替的核心序列,两侧是作为界面锚定物的色氨酸:乙酰基-GWW(LA)(6)LWWA-乙醇胺(WALP19)。在肽的不同位置引入了单个氘标记的丙氨酸。将肽掺入二月桂酰-(二-C12:0-)、二肉豆蔻酰-(二-C14:0-)或二油酰-(二-C18:1(c)-)磷脂酰胆碱的定向双层膜中。核磁共振数据与WALP19的取向非常吻合,其特征是具有明显非零的倾斜度,相对于膜法线约为4度,并且在所有三种脂质中围绕膜法线快速重新取向。尽管WALP19在不同脂质中的取向略有不同,但疏水不匹配似乎不是导致倾斜的主要因素。我们认为,肽本身具有固有的优选倾斜取向,这可能与肽的表面特征或色氨酸吲哚锚定物相对于脂质、肽主链以及膜/水界面的分布有关。此外,这些数据使我们能够更精确地定义该跨膜α-螺旋中局部丙氨酸的几何结构。