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高分辨率比较基因组杂交(CGH)在检测和鉴定染色体结构异常中的应用价值。

Usefulness of high-resolution comparative genomic hybridization (CGH) for detecting and characterizing constitutional chromosome abnormalities.

作者信息

Ness Gro Oddveig, Lybaek Helle, Houge Gunnar

机构信息

Center for Medical Genetics and Molecular Medicine, Haukeland University Hospital, Bergen, Norway.

出版信息

Am J Med Genet. 2002 Nov 22;113(2):125-36. doi: 10.1002/ajmg.10593.

DOI:10.1002/ajmg.10593
PMID:12407702
Abstract

Comparative genomic hybridization (CGH) is a technique for detection of chromosomal imbalances in a genomic DNA sample. We here report the application of the recently developed method of high-resolution CGH on DNA samples from 66 children having various degrees of delayed psychomotor development with or without clear dysmorphic features and congenital malformations. In 5 of 50 patients with apparently normal karyotypes, a deletion or duplication was revealed by CGH. Only one of these cases had a subtelomeric rearrangement. In one of seven cases with a de novo apparently balanced translocation, deletions were found. In all nine cases where the origin of a marker chromosome or additional chromosomal material was difficult to determine, CGH gave a precise identification. The following findings were from cases having a deletion or duplication as the sole chromosomal imbalance; dup(2)(p16p21), del(4)(q21q21), del(6)(q14q15), del(6)(p12p12), dup(6)(q24qter), and dup(15)(q11q13). One case had dup(9)(p11pter) combined with a very small subtelomeric deletion on 6q. In our hands, CGH is highly useful not only for identifying known chromosomal imbalances, but also for finding elusive deletions or duplications in the large group of children with developmental delay with or without congenital abnormalities. In such cases, the diagnostic yield of CGH appears to be higher than what has been reported from subtelomeric FISH screening.

摘要

比较基因组杂交(CGH)是一种用于检测基因组DNA样本中染色体失衡的技术。我们在此报告了最近开发的高分辨率CGH方法在66名有不同程度精神运动发育迟缓且有或无明显畸形特征及先天性畸形的儿童DNA样本中的应用。在50名核型明显正常的患者中,有5名通过CGH检测出缺失或重复。这些病例中只有1例有亚端粒重排。在7例新发明显平衡易位的病例中,有1例发现了缺失。在所有9例难以确定标记染色体或额外染色体物质来源的病例中,CGH都给出了精确的鉴定结果。以下是仅存在缺失或重复作为唯一染色体失衡情况的病例结果:dup(2)(p16p21)、del(4)(q21q21)、del(6)(q14q15)、del(6)(p12p12)、dup(6)(q24qter)和dup(15)(q11q13)。1例有dup(9)(p11pter)并伴有6号染色体q臂上一个非常小的亚端粒缺失。在我们的研究中,CGH不仅对于识别已知的染色体失衡非常有用,而且对于在一大群有或无先天性异常的发育迟缓儿童中发现难以捉摸的缺失或重复也很有用。在这类病例中,CGH的诊断检出率似乎高于亚端粒荧光原位杂交(FISH)筛查所报告的结果。

相似文献

1
Usefulness of high-resolution comparative genomic hybridization (CGH) for detecting and characterizing constitutional chromosome abnormalities.高分辨率比较基因组杂交(CGH)在检测和鉴定染色体结构异常中的应用价值。
Am J Med Genet. 2002 Nov 22;113(2):125-36. doi: 10.1002/ajmg.10593.
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High resolution comparative genomic hybridisation analysis reveals imbalances in dyschromosomal patients with normal or apparently balanced conventional karyotypes.高分辨率比较基因组杂交分析揭示了染色体染色异常患者中存在的不平衡,这些患者具有正常或表面上平衡的传统核型。
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Applications of comparative genomic hybridisation in constitutional chromosome studies.比较基因组杂交技术在染色体结构异常研究中的应用
J Med Genet. 1999 Jul;36(7):511-7.

引用本文的文献

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Human molecular cytogenetics: From cells to nucleotides.人类分子细胞遗传学:从细胞到核苷酸。
Genet Mol Biol. 2014 Mar;37(1 Suppl):194-209. doi: 10.1590/s1415-47572014000200006.
2
Primed in situ labeling technique for subtelomeric rearrangements in 70 children with idiopathic mental retardation.用于70例特发性智力障碍患儿亚端粒重排的原位引物标记技术
J Huazhong Univ Sci Technolog Med Sci. 2011 Dec;31(6):834-836. doi: 10.1007/s11596-011-0686-7. Epub 2011 Dec 16.
3
Array-CGH detection of three cryptic submicroscopic imbalances in a complex chromosome rearrangement.
采用阵列比较基因组杂交技术检测复杂染色体重排中的三个隐匿性亚显微失衡。
J Genet. 2009 Dec;88(3):369-72. doi: 10.1007/s12041-009-0056-4.
4
Detection of genomic imbalances by array based comparative genomic hybridisation in fetuses with multiple malformations.采用基于微阵列的比较基因组杂交技术检测多发畸形胎儿的基因组失衡情况。
J Med Genet. 2005 Feb;42(2):121-8. doi: 10.1136/jmg.2004.025478.
5
Microarray based comparative genomic hybridisation (array-CGH) detects submicroscopic chromosomal deletions and duplications in patients with learning disability/mental retardation and dysmorphic features.基于微阵列的比较基因组杂交技术(阵列比较基因组杂交,array-CGH)可检测学习障碍/智力迟钝及畸形特征患者的亚显微染色体缺失和重复。
J Med Genet. 2004 Apr;41(4):241-8. doi: 10.1136/jmg.2003.017731.